Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC067945.1-201ENST00000342609 618 ntBASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 RNU6-839P-201ENST00000363347 108 ntBASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 RPS3AP23-201ENST00000401762 784 ntBASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 AL355143.1-201ENST00000407101 841 ntBASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 VN1R8P-201ENST00000407739 893 ntBASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 RNA5SP39-201ENST00000411245 120 ntBASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 TMSB10P2-201ENST00000416049 131 ntBASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 MTND4P3-201ENST00000417829 541 ntBASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 RPS27AP7-201ENST00000422792 455 ntBASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 CNOT7P1-201ENST00000429006 852 ntBASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 AL138878.2-201ENST00000440581 1241 ntBASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 MTCYBP42-201ENST00000444653 1130 ntBASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 NF1P3-201ENST00000457709 450 ntBASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 AP000926.1-201ENST00000479573 241 ntBASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 AC069528.1-202ENST00000482888 637 ntBASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 AC069306.1-201ENST00000507006 843 ntBASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 AC025674.1-201ENST00000507074 324 ntBASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 AC016065.2-201ENST00000514530 444 ntBASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 OR4G1P-201ENST00000588632 938 ntBASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 AL020997.3-201ENST00000602843 359 ntBASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 AC073387.2-201ENST00000604797 784 ntBASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 IGHV3-29-201ENST00000604817 344 ntBASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 AL160290.3-201ENST00000604869 165 ntBASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 AC092953.2-201ENST00000608000 699 ntBASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 AL133445.2-201ENST00000611191 527 ntBASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
NHLRC1Q6VVB1 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 AC018529.3-201ENST00000624212 2254 ntBASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 MFSD8-242ENST00000641690 4199 ntBASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 AC008033.1-201ENST00000216407 1162 ntBASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 RNU6-1066P-201ENST00000363573 105 ntBASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 SNORD74.4-201ENST00000364129 80 ntBASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 RNU6-1226P-201ENST00000384317 107 ntBASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 MIR620-201ENST00000385232 95 ntBASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 AL139098.1-201ENST00000407291 389 ntBASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 AL023807.1-201ENST00000407932 359 ntBASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 AL133384.1-201ENST00000412744 351 ntBASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 USP9YP21-201ENST00000420603 432 ntBASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 AL356387.2-201ENST00000422272 243 ntBASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 DPRXP1-201ENST00000426312 460 ntBASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 RPS12P10-201ENST00000427031 377 ntBASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 RPL23AP25-201ENST00000430973 463 ntBASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 AL353748.1-201ENST00000440753 474 ntBASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 RPS29P33-201ENST00000456717 146 ntBASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 VPS26AP1-201ENST00000483197 979 ntBASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 HMGB1P38-201ENST00000490557 577 ntBASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 RPL23AP72-201ENST00000492447 435 ntBASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 CAB39P1-201ENST00000502277 460 ntBASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 AC011352.3-201ENST00000505162 593 ntBASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 AC109471.1-201ENST00000511631 612 ntBASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 AC023141.12-201ENST00000512399 199 ntBASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 Vault.1-201ENST00000516474 102 ntBASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 AC092470.1-201ENST00000546187 132 ntBASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.93□□□□□ -1.78
NHLRC1Q6VVB1 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms