Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
RC3H1Q5TC82 AC099494.2-201ENST00000623371 978 ntBASIC7.31□□□□□ -1.24
RC3H1Q5TC82 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.31□□□□□ -1.24
RC3H1Q5TC82 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.31□□□□□ -1.24
RC3H1Q5TC82 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RC3H1Q5TC82 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RC3H1Q5TC82 AC005618.1-201ENST00000606901 3148 ntBASIC7.31□□□□□ -1.24
RC3H1Q5TC82 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RC3H1Q5TC82 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RC3H1Q5TC82 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RC3H1Q5TC82 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC7.3□□□□□ -1.24
RC3H1Q5TC82 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.3□□□□□ -1.24
RC3H1Q5TC82 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RC3H1Q5TC82 U8.4-201ENST00000363626 134 ntBASIC7.3□□□□□ -1.24
RC3H1Q5TC82 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RC3H1Q5TC82 MIR765-201ENST00000390226 114 ntBASIC7.3□□□□□ -1.24
RC3H1Q5TC82 MTCYBP4-201ENST00000401524 249 ntBASIC7.3□□□□□ -1.24
RC3H1Q5TC82 AL136116.1-201ENST00000403591 381 ntBASIC7.3□□□□□ -1.24
RC3H1Q5TC82 RPS12P24-201ENST00000412619 387 ntBASIC7.3□□□□□ -1.24
RC3H1Q5TC82 METTL15P3-201ENST00000415522 1221 ntBASIC7.3□□□□□ -1.24
RC3H1Q5TC82 BOLA3P4-201ENST00000418151 400 ntBASIC7.3□□□□□ -1.24
RC3H1Q5TC82 RPL21P110-201ENST00000433345 446 ntBASIC7.3□□□□□ -1.24
RC3H1Q5TC82 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC7.3□□□□□ -1.24
RC3H1Q5TC82 RPS3AP52-201ENST00000435639 297 ntBASIC7.3□□□□□ -1.24
RC3H1Q5TC82 RPL7P29-201ENST00000437151 728 ntBASIC7.3□□□□□ -1.24
RC3H1Q5TC82 MTCO1P27-201ENST00000448269 226 ntBASIC7.3□□□□□ -1.24
RC3H1Q5TC82 AC104634.1-201ENST00000452720 462 ntBASIC7.3□□□□□ -1.24
RC3H1Q5TC82 AL645937.3-201ENST00000453647 936 ntBASIC7.3□□□□□ -1.24
RC3H1Q5TC82 Y_RNA.635-201ENST00000459041 101 ntBASIC7.3□□□□□ -1.24
RC3H1Q5TC82 RN7SL51P-201ENST00000468230 285 ntBASIC7.3□□□□□ -1.24
RC3H1Q5TC82 AC078785.3-201ENST00000476607 425 ntBASIC7.3□□□□□ -1.24
RC3H1Q5TC82 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC7.3□□□□□ -1.24
RC3H1Q5TC82 EIF4EP3-201ENST00000498782 656 ntBASIC7.3□□□□□ -1.24
RC3H1Q5TC82 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC7.3□□□□□ -1.24
RC3H1Q5TC82 RNU6-789P-201ENST00000517105 102 ntBASIC7.3□□□□□ -1.24
RC3H1Q5TC82 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC7.3□□□□□ -1.24
RC3H1Q5TC82 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC7.3□□□□□ -1.24
RC3H1Q5TC82 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC7.3□□□□□ -1.24
RC3H1Q5TC82 AC126177.5-201ENST00000549599 178 ntBASIC7.3□□□□□ -1.24
RC3H1Q5TC82 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC7.3□□□□□ -1.24
RC3H1Q5TC82 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.3□□□□□ -1.24
RC3H1Q5TC82 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC7.3□□□□□ -1.24
RC3H1Q5TC82 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC7.3□□□□□ -1.24
RC3H1Q5TC82 MIR6748-201ENST00000610433 71 ntBASIC7.3□□□□□ -1.24
RC3H1Q5TC82 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC7.3□□□□□ -1.24
RC3H1Q5TC82 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC7.3□□□□□ -1.24
RC3H1Q5TC82 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
RC3H1Q5TC82 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
RC3H1Q5TC82 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RC3H1Q5TC82 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
RC3H1Q5TC82 AC130304.1-201ENST00000622942 2385 ntBASIC7.3□□□□□ -1.24
RC3H1Q5TC82 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC7.29□□□□□ -1.24
RC3H1Q5TC82 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RC3H1Q5TC82 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RC3H1Q5TC82 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC7.29□□□□□ -1.24
RC3H1Q5TC82 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RC3H1Q5TC82 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
RC3H1Q5TC82 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RC3H1Q5TC82 MGP-201ENST00000228938 694 ntTSL 3 BASIC7.29□□□□□ -1.24
RC3H1Q5TC82 OR1S2-201ENST00000302592 978 ntBASIC7.29□□□□□ -1.24
RC3H1Q5TC82 Y_RNA.112-201ENST00000363250 102 ntBASIC7.29□□□□□ -1.24
RC3H1Q5TC82 Y_RNA.148-201ENST00000363557 117 ntBASIC7.29□□□□□ -1.24
RC3H1Q5TC82 Y_RNA.158-201ENST00000363651 101 ntBASIC7.29□□□□□ -1.24
RC3H1Q5TC82 RNU6-769P-201ENST00000384407 104 ntBASIC7.29□□□□□ -1.24
RC3H1Q5TC82 RNU6-831P-201ENST00000384548 107 ntBASIC7.29□□□□□ -1.24
RC3H1Q5TC82 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
RC3H1Q5TC82 RNU6-244P-201ENST00000391028 104 ntBASIC7.29□□□□□ -1.24
RC3H1Q5TC82 MIR1305-201ENST00000408300 86 ntBASIC7.29□□□□□ -1.24
RC3H1Q5TC82 RN7SKP213-201ENST00000410746 298 ntBASIC7.29□□□□□ -1.24
RC3H1Q5TC82 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC7.29□□□□□ -1.24
RC3H1Q5TC82 DUTP6-201ENST00000425573 462 ntBASIC7.29□□□□□ -1.24
RC3H1Q5TC82 USP24P1-201ENST00000433802 779 ntBASIC7.29□□□□□ -1.24
RC3H1Q5TC82 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC7.29□□□□□ -1.24
RC3H1Q5TC82 AC079922.1-201ENST00000443291 359 ntBASIC7.29□□□□□ -1.24
RC3H1Q5TC82 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC7.29□□□□□ -1.24
RC3H1Q5TC82 MTCO1P29-201ENST00000496868 288 ntBASIC7.29□□□□□ -1.24
RC3H1Q5TC82 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC7.29□□□□□ -1.24
RC3H1Q5TC82 RNU6-1003P-201ENST00000517099 105 ntBASIC7.29□□□□□ -1.24
RC3H1Q5TC82 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC7.29□□□□□ -1.24
RC3H1Q5TC82 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC7.29□□□□□ -1.24
RC3H1Q5TC82 AC009902.1-201ENST00000519351 183 ntBASIC7.29□□□□□ -1.24
RC3H1Q5TC82 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC7.29□□□□□ -1.24
RC3H1Q5TC82 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC7.29□□□□□ -1.24
RC3H1Q5TC82 HSPE1P2-201ENST00000554777 306 ntBASIC7.29□□□□□ -1.24
RC3H1Q5TC82 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC7.29□□□□□ -1.24
RC3H1Q5TC82 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC7.29□□□□□ -1.24
RC3H1Q5TC82 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC7.29□□□□□ -1.24
RC3H1Q5TC82 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC7.29□□□□□ -1.24
RC3H1Q5TC82 AC091193.1-201ENST00000604640 448 ntBASIC7.29□□□□□ -1.24
RC3H1Q5TC82 RMST_9.1-201ENST00000619945 193 ntBASIC7.29□□□□□ -1.24
RC3H1Q5TC82 AL359757.2-201ENST00000624309 274 ntBASIC7.29□□□□□ -1.24
RC3H1Q5TC82 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC7.29□□□□□ -1.24
RC3H1Q5TC82 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
RC3H1Q5TC82 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RC3H1Q5TC82 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RC3H1Q5TC82 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RC3H1Q5TC82 AC092724.1-201ENST00000624623 3397 ntBASIC7.29□□□□□ -1.24
RC3H1Q5TC82 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
RC3H1Q5TC82 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
RC3H1Q5TC82 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 151.6 ms