Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
VARS2Q5ST30 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
VARS2Q5ST30 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
VARS2Q5ST30 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
VARS2Q5ST30 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.35□□□□□ -1.23
VARS2Q5ST30 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
VARS2Q5ST30 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
VARS2Q5ST30 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
VARS2Q5ST30 RNU1-5P-201ENST00000362684 144 ntBASIC7.35□□□□□ -1.23
VARS2Q5ST30 RNU1-76P-201ENST00000362903 159 ntBASIC7.35□□□□□ -1.23
VARS2Q5ST30 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
VARS2Q5ST30 RNU6-1035P-201ENST00000384477 107 ntBASIC7.35□□□□□ -1.23
VARS2Q5ST30 AL356421.1-201ENST00000403255 413 ntBASIC7.35□□□□□ -1.23
VARS2Q5ST30 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC7.35□□□□□ -1.23
VARS2Q5ST30 GSTA6P-201ENST00000424144 582 ntBASIC7.35□□□□□ -1.23
VARS2Q5ST30 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.35□□□□□ -1.23
VARS2Q5ST30 FTH1P10-202ENST00000430907 550 ntBASIC7.35□□□□□ -1.23
VARS2Q5ST30 CBX1P2-201ENST00000453841 458 ntBASIC7.35□□□□□ -1.23
VARS2Q5ST30 RPL23AP81-201ENST00000455252 467 ntBASIC7.35□□□□□ -1.23
VARS2Q5ST30 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC7.35□□□□□ -1.23
VARS2Q5ST30 CTSLP6-201ENST00000458273 1002 ntBASIC7.35□□□□□ -1.23
VARS2Q5ST30 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.35□□□□□ -1.23
VARS2Q5ST30 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC7.35□□□□□ -1.23
VARS2Q5ST30 AC055733.3-201ENST00000505214 523 ntBASIC7.35□□□□□ -1.23
VARS2Q5ST30 AC096754.1-201ENST00000508904 818 ntBASIC7.35□□□□□ -1.23
VARS2Q5ST30 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC7.35□□□□□ -1.23
VARS2Q5ST30 FTH1P21-201ENST00000512179 511 ntBASIC7.35□□□□□ -1.23
VARS2Q5ST30 RNU6-911P-201ENST00000516523 104 ntBASIC7.35□□□□□ -1.23
VARS2Q5ST30 TRAPPC2P2-201ENST00000517589 409 ntBASIC7.35□□□□□ -1.23
VARS2Q5ST30 APAF1-207ENST00000547743 651 ntTSL 3 BASIC7.35□□□□□ -1.23
VARS2Q5ST30 AC092375.1-201ENST00000550410 637 ntBASIC7.35□□□□□ -1.23
VARS2Q5ST30 AC126177.3-201ENST00000551839 688 ntBASIC7.35□□□□□ -1.23
VARS2Q5ST30 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC7.35□□□□□ -1.23
VARS2Q5ST30 MIR3157-201ENST00000578688 85 ntBASIC7.35□□□□□ -1.23
VARS2Q5ST30 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
VARS2Q5ST30 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC7.35□□□□□ -1.23
VARS2Q5ST30 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.35□□□□□ -1.23
VARS2Q5ST30 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC7.35□□□□□ -1.23
VARS2Q5ST30 U2.17-201ENST00000611454 95 ntBASIC7.35□□□□□ -1.23
VARS2Q5ST30 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC7.35□□□□□ -1.23
VARS2Q5ST30 MIR6806-201ENST00000622141 64 ntBASIC7.35□□□□□ -1.23
VARS2Q5ST30 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC7.35□□□□□ -1.23
VARS2Q5ST30 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC7.35□□□□□ -1.23
VARS2Q5ST30 AC055839.1-201ENST00000634467 498 ntBASIC7.35□□□□□ -1.23
VARS2Q5ST30 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC7.35□□□□□ -1.23
VARS2Q5ST30 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
VARS2Q5ST30 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC7.35□□□□□ -1.23
VARS2Q5ST30 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.35□□□□□ -1.23
VARS2Q5ST30 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
VARS2Q5ST30 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
VARS2Q5ST30 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
VARS2Q5ST30 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7.35□□□□□ -1.23
VARS2Q5ST30 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
VARS2Q5ST30 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
VARS2Q5ST30 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
VARS2Q5ST30 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
VARS2Q5ST30 AP003175.1-201ENST00000641383 6658 ntBASIC7.34□□□□□ -1.23
VARS2Q5ST30 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
VARS2Q5ST30 TCP11X1-202ENST00000622971 1372 ntBASIC7.34□□□□□ -1.23
VARS2Q5ST30 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.23
VARS2Q5ST30 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
VARS2Q5ST30 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
VARS2Q5ST30 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
VARS2Q5ST30 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
VARS2Q5ST30 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
VARS2Q5ST30 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.34□□□□□ -1.23
VARS2Q5ST30 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
VARS2Q5ST30 RNA5SP188-201ENST00000362916 129 ntBASIC7.34□□□□□ -1.23
VARS2Q5ST30 Y_RNA.580-201ENST00000391004 95 ntBASIC7.34□□□□□ -1.23
VARS2Q5ST30 RN7SKP235-201ENST00000410662 305 ntBASIC7.34□□□□□ -1.23
VARS2Q5ST30 TRAPPC2P4-201ENST00000421750 331 ntBASIC7.34□□□□□ -1.23
VARS2Q5ST30 AC091390.2-201ENST00000432573 374 ntBASIC7.34□□□□□ -1.23
VARS2Q5ST30 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC7.34□□□□□ -1.23
VARS2Q5ST30 OR52I1-201ENST00000450052 1050 ntBASIC7.34□□□□□ -1.23
VARS2Q5ST30 AC087884.1-201ENST00000469738 328 ntBASIC7.34□□□□□ -1.23
VARS2Q5ST30 AC093840.1-201ENST00000511599 336 ntBASIC7.34□□□□□ -1.23
VARS2Q5ST30 RNA5SP318-201ENST00000516352 92 ntBASIC7.34□□□□□ -1.23
VARS2Q5ST30 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC7.34□□□□□ -1.23
VARS2Q5ST30 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.34□□□□□ -1.23
VARS2Q5ST30 AC024619.4-201ENST00000580924 316 ntBASIC7.34□□□□□ -1.23
VARS2Q5ST30 AC034102.8-201ENST00000615146 484 ntBASIC7.34□□□□□ -1.23
VARS2Q5ST30 AP003789.1-201ENST00000617737 605 ntBASIC7.34□□□□□ -1.23
VARS2Q5ST30 MIR1910-201ENST00000636955 80 ntBASIC7.34□□□□□ -1.23
VARS2Q5ST30 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
VARS2Q5ST30 MFSD8-217ENST00000641178 4374 ntBASIC7.34□□□□□ -1.23
VARS2Q5ST30 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
VARS2Q5ST30 AC012213.2-201ENST00000562917 4597 ntBASIC7.34□□□□□ -1.23
VARS2Q5ST30 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
VARS2Q5ST30 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.34□□□□□ -1.23
VARS2Q5ST30 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
VARS2Q5ST30 FANCD2P2-201ENST00000437591 1400 ntBASIC7.34□□□□□ -1.23
VARS2Q5ST30 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
VARS2Q5ST30 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
VARS2Q5ST30 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
VARS2Q5ST30 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
VARS2Q5ST30 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
VARS2Q5ST30 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC7.33□□□□□ -1.24
VARS2Q5ST30 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
VARS2Q5ST30 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
VARS2Q5ST30 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms