Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC144BQ3MJ40 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC144BQ3MJ40 IRF5P1-201ENST00000504852 2164 ntBASIC5.9□□□□□ -1.47
CCDC144BQ3MJ40 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
CCDC144BQ3MJ40 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC144BQ3MJ40 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CCDC144BQ3MJ40 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 AL672167.1-206ENST00000356293 943 ntBASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 RN7SKP95-201ENST00000362860 303 ntBASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 Y_RNA.318-201ENST00000365131 97 ntBASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 RNA5SP223-201ENST00000365174 120 ntBASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 RNA5SP87-201ENST00000384155 118 ntBASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 AC104333.2-201ENST00000422630 192 ntBASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 AL831737.1-201ENST00000441288 271 ntBASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 AC079168.1-201ENST00000458741 345 ntBASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 AC006463.2-201ENST00000473326 348 ntBASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 AC116337.2-201ENST00000477662 156 ntBASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 MTND5P4-201ENST00000514978 288 ntBASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 RNU6-513P-201ENST00000516104 104 ntBASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 GSTP1P1-201ENST00000548078 319 ntBASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 NMNAT1P1-201ENST00000554095 876 ntBASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 EDDM3DP-201ENST00000554692 434 ntBASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 AL133457.1-201ENST00000564251 987 ntBASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 ROCK1P1-201ENST00000573767 549 ntBASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 AP001004.1-201ENST00000582468 324 ntBASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 AC008507.1-201ENST00000587506 734 ntBASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 AC067852.4-201ENST00000590314 478 ntBASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 AL627230.1-201ENST00000613077 211 ntBASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 AL591926.8-201ENST00000616876 211 ntBASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 MIR6810-201ENST00000622701 70 ntBASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 Z95327.2-201ENST00000414579 1873 ntBASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 AL356473.1-201ENST00000406203 1408 ntBASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 AP002907.1-201ENST00000606361 1430 ntBASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 AC022893.2-201ENST00000564832 3296 ntBASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CCDC144BQ3MJ40 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 ZNF33CP-201ENST00000432492 2030 ntBASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 RNA5SP90-201ENST00000364801 99 ntBASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 ENSAP1-201ENST00000392855 326 ntBASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 AC016769.3-201ENST00000396562 315 ntBASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 BTF3L4P1-201ENST00000413813 468 ntBASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 AC004448.2-201ENST00000422360 586 ntBASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 MTCO2P16-201ENST00000436962 677 ntBASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 RPS29P10-201ENST00000439197 166 ntBASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 COX6CP2-201ENST00000444980 225 ntBASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 KNOP1P3-201ENST00000446933 426 ntBASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 AC009220.1-201ENST00000451614 275 ntBASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 BX276092.4-201ENST00000452056 248 ntBASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 ZNF114P1-201ENST00000453500 292 ntBASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 AC090453.1-201ENST00000495560 436 ntBASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 AC108941.1-201ENST00000502853 530 ntBASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 AC091435.1-201ENST00000505442 584 ntBASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC144BQ3MJ40 OR51K1P-201ENST00000510214 950 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms