Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.27□□□□□ -1.89
VBP1P61758 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.27□□□□□ -1.89
VBP1P61758 AC026951.1-201ENST00000559530 2459 ntBASIC3.27□□□□□ -1.89
VBP1P61758 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
VBP1P61758 RNU6-805P-201ENST00000365643 106 ntBASIC3.27□□□□□ -1.89
VBP1P61758 MIR621-201ENST00000384919 96 ntBASIC3.27□□□□□ -1.89
VBP1P61758 MIR129-1-201ENST00000384972 72 ntBASIC3.27□□□□□ -1.89
VBP1P61758 SKINT1L-201ENST00000401057 817 ntBASIC3.27□□□□□ -1.89
VBP1P61758 HMGB3P18-201ENST00000406327 590 ntBASIC3.27□□□□□ -1.89
VBP1P61758 RNA5SP293-201ENST00000410527 113 ntBASIC3.27□□□□□ -1.89
VBP1P61758 RNA5SP31-201ENST00000411144 127 ntBASIC3.27□□□□□ -1.89
VBP1P61758 RNA5SP107-201ENST00000411358 122 ntBASIC3.27□□□□□ -1.89
VBP1P61758 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC3.27□□□□□ -1.89
VBP1P61758 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.27□□□□□ -1.89
VBP1P61758 GTF2IP23-201ENST00000423746 351 ntBASIC3.27□□□□□ -1.89
VBP1P61758 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.27□□□□□ -1.89
VBP1P61758 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.27□□□□□ -1.89
VBP1P61758 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.27□□□□□ -1.89
VBP1P61758 AC125238.1-201ENST00000448842 249 ntBASIC3.27□□□□□ -1.89
VBP1P61758 PPIA-203ENST00000451562 544 ntTSL 2 BASIC3.27□□□□□ -1.89
VBP1P61758 AC084357.1-201ENST00000473404 255 ntBASIC3.27□□□□□ -1.89
VBP1P61758 AC108860.1-201ENST00000484521 383 ntBASIC3.27□□□□□ -1.89
VBP1P61758 TXNP6-201ENST00000510190 310 ntBASIC3.27□□□□□ -1.89
VBP1P61758 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
VBP1P61758 BRD9P1-201ENST00000529855 560 ntBASIC3.27□□□□□ -1.89
VBP1P61758 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
VBP1P61758 AC008147.3-201ENST00000548666 354 ntBASIC3.27□□□□□ -1.89
VBP1P61758 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.27□□□□□ -1.89
VBP1P61758 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.27□□□□□ -1.89
VBP1P61758 SNRPGP15-201ENST00000600149 222 ntBASIC3.27□□□□□ -1.89
VBP1P61758 HMGN2P28-201ENST00000606102 262 ntBASIC3.27□□□□□ -1.89
VBP1P61758 SNORA62.6-201ENST00000606322 83 ntBASIC3.27□□□□□ -1.89
VBP1P61758 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
VBP1P61758 AC022149.2-201ENST00000621061 203 ntBASIC3.27□□□□□ -1.89
VBP1P61758 AL590240.3-201ENST00000621416 943 ntBASIC3.27□□□□□ -1.89
VBP1P61758 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
VBP1P61758 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
VBP1P61758 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VBP1P61758 AC002546.1-201ENST00000588041 2504 ntBASIC3.26□□□□□ -1.89
VBP1P61758 MTND5P7-201ENST00000413558 1798 ntBASIC3.26□□□□□ -1.89
VBP1P61758 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VBP1P61758 SNORA73.2-201ENST00000364946 201 ntBASIC3.26□□□□□ -1.89
VBP1P61758 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VBP1P61758 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VBP1P61758 RNA5SP87-201ENST00000384155 118 ntBASIC3.26□□□□□ -1.89
VBP1P61758 RNA5SP424-201ENST00000390988 115 ntBASIC3.26□□□□□ -1.89
VBP1P61758 RNU1-101P-201ENST00000391171 127 ntBASIC3.26□□□□□ -1.89
VBP1P61758 RCC2P2-201ENST00000422174 918 ntBASIC3.26□□□□□ -1.89
VBP1P61758 FAR1P1-201ENST00000427163 934 ntBASIC3.26□□□□□ -1.89
VBP1P61758 AP000907.1-201ENST00000428428 510 ntBASIC3.26□□□□□ -1.89
VBP1P61758 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.26□□□□□ -1.89
VBP1P61758 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.26□□□□□ -1.89
VBP1P61758 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.26□□□□□ -1.89
VBP1P61758 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.26□□□□□ -1.89
VBP1P61758 MTND2P28-201ENST00000457540 1044 ntBASIC3.26□□□□□ -1.89
VBP1P61758 RPS26P21-201ENST00000475397 348 ntBASIC3.26□□□□□ -1.89
VBP1P61758 AC041039.1-201ENST00000485656 536 ntBASIC3.26□□□□□ -1.89
VBP1P61758 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.26□□□□□ -1.89
VBP1P61758 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.26□□□□□ -1.89
VBP1P61758 AL139099.1-201ENST00000497398 403 ntBASIC3.26□□□□□ -1.89
VBP1P61758 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.26□□□□□ -1.89
VBP1P61758 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VBP1P61758 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.26□□□□□ -1.89
VBP1P61758 FABP5P12-201ENST00000515543 389 ntBASIC3.26□□□□□ -1.89
VBP1P61758 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.26□□□□□ -1.89
VBP1P61758 RN7SKP282-201ENST00000516824 299 ntBASIC3.26□□□□□ -1.89
VBP1P61758 NDUFA5P2-201ENST00000519723 344 ntBASIC3.26□□□□□ -1.89
VBP1P61758 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VBP1P61758 MTCYBP41-201ENST00000528913 1123 ntBASIC3.26□□□□□ -1.89
VBP1P61758 AC009643.1-201ENST00000532030 391 ntBASIC3.26□□□□□ -1.89
VBP1P61758 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.26□□□□□ -1.89
VBP1P61758 AL121766.1-201ENST00000547436 487 ntBASIC3.26□□□□□ -1.89
VBP1P61758 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.26□□□□□ -1.89
VBP1P61758 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
VBP1P61758 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.26□□□□□ -1.89
VBP1P61758 AC034268.2-201ENST00000571784 482 ntBASIC3.26□□□□□ -1.89
VBP1P61758 MTCO3P24-201ENST00000572729 782 ntBASIC3.26□□□□□ -1.89
VBP1P61758 MIR4646-201ENST00000580775 63 ntBASIC3.26□□□□□ -1.89
VBP1P61758 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
VBP1P61758 AC133644.2-201ENST00000608142 540 ntBASIC3.26□□□□□ -1.89
VBP1P61758 AL390240.1-201ENST00000612950 384 ntBASIC3.26□□□□□ -1.89
VBP1P61758 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VBP1P61758 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VBP1P61758 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VBP1P61758 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.26□□□□□ -1.89
VBP1P61758 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
VBP1P61758 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
VBP1P61758 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
VBP1P61758 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
VBP1P61758 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.25□□□□□ -1.89
VBP1P61758 AL590290.1-201ENST00000405336 380 ntBASIC3.25□□□□□ -1.89
VBP1P61758 RNU6-233P-201ENST00000410845 141 ntBASIC3.25□□□□□ -1.89
VBP1P61758 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.25□□□□□ -1.89
VBP1P61758 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.25□□□□□ -1.89
VBP1P61758 NDUFB4P5-201ENST00000415445 361 ntBASIC3.25□□□□□ -1.89
VBP1P61758 Z97055.1-201ENST00000419730 712 ntBASIC3.25□□□□□ -1.89
VBP1P61758 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VBP1P61758 RPL23AP24-201ENST00000458203 385 ntBASIC3.25□□□□□ -1.89
VBP1P61758 HMGN2P13-201ENST00000476476 274 ntBASIC3.25□□□□□ -1.89
VBP1P61758 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms