Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FOXG1P55316 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
FOXG1P55316 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
FOXG1P55316 RNU6-259P-201ENST00000383999 107 ntBASIC4.28□□□□□ -1.72
FOXG1P55316 MIR585-201ENST00000384887 94 ntBASIC4.28□□□□□ -1.72
FOXG1P55316 SNORD115-47-201ENST00000391226 86 ntBASIC4.28□□□□□ -1.72
FOXG1P55316 U3.30-201ENST00000391308 210 ntBASIC4.28□□□□□ -1.72
FOXG1P55316 TAF9BP1-201ENST00000396646 746 ntBASIC4.28□□□□□ -1.72
FOXG1P55316 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.28□□□□□ -1.72
FOXG1P55316 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.28□□□□□ -1.72
FOXG1P55316 OR51A5P-201ENST00000415429 942 ntBASIC4.28□□□□□ -1.72
FOXG1P55316 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.28□□□□□ -1.72
FOXG1P55316 GTF2IP23-201ENST00000423746 351 ntBASIC4.28□□□□□ -1.72
FOXG1P55316 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.28□□□□□ -1.72
FOXG1P55316 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.28□□□□□ -1.72
FOXG1P55316 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.28□□□□□ -1.72
FOXG1P55316 B3GNT2P1-201ENST00000434960 952 ntBASIC4.28□□□□□ -1.72
FOXG1P55316 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.28□□□□□ -1.72
FOXG1P55316 RPL36AP15-201ENST00000444514 266 ntBASIC4.28□□□□□ -1.72
FOXG1P55316 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.28□□□□□ -1.72
FOXG1P55316 AURKAPS2-201ENST00000454983 333 ntBASIC4.28□□□□□ -1.72
FOXG1P55316 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.28□□□□□ -1.72
FOXG1P55316 AC107398.1-201ENST00000486904 505 ntBASIC4.28□□□□□ -1.72
FOXG1P55316 AC023424.1-201ENST00000496058 459 ntBASIC4.28□□□□□ -1.72
FOXG1P55316 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.28□□□□□ -1.72
FOXG1P55316 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.28□□□□□ -1.72
FOXG1P55316 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.28□□□□□ -1.72
FOXG1P55316 AC105031.1-201ENST00000518550 476 ntBASIC4.28□□□□□ -1.72
FOXG1P55316 AC104383.1-201ENST00000530297 370 ntBASIC4.28□□□□□ -1.72
FOXG1P55316 AP001880.2-201ENST00000538233 448 ntBASIC4.28□□□□□ -1.72
FOXG1P55316 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.28□□□□□ -1.72
FOXG1P55316 GLYCAM1-201ENST00000546596 285 ntBASIC4.28□□□□□ -1.72
FOXG1P55316 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.28□□□□□ -1.72
FOXG1P55316 AC018552.1-201ENST00000562099 811 ntBASIC4.28□□□□□ -1.72
FOXG1P55316 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.28□□□□□ -1.72
FOXG1P55316 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.28□□□□□ -1.72
FOXG1P55316 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
FOXG1P55316 AP000907.4-201ENST00000604143 237 ntBASIC4.28□□□□□ -1.72
FOXG1P55316 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.28□□□□□ -1.72
FOXG1P55316 AC010424.2-201ENST00000607594 443 ntBASIC4.28□□□□□ -1.72
FOXG1P55316 AL159169.3-201ENST00000608871 561 ntBASIC4.28□□□□□ -1.72
FOXG1P55316 AC128687.2-201ENST00000609657 566 ntBASIC4.28□□□□□ -1.72
FOXG1P55316 Y_RNA.804-201ENST00000615262 101 ntBASIC4.28□□□□□ -1.72
FOXG1P55316 AL357080.1-201ENST00000617394 239 ntBASIC4.28□□□□□ -1.72
FOXG1P55316 BX005214.3-202ENST00000619809 325 ntBASIC4.28□□□□□ -1.72
FOXG1P55316 AC015726.3-201ENST00000624501 418 ntBASIC4.28□□□□□ -1.72
FOXG1P55316 MFSD8-245ENST00000641743 948 ntBASIC4.28□□□□□ -1.72
FOXG1P55316 AC073869.10-201ENST00000642016 354 ntBASIC4.28□□□□□ -1.72
FOXG1P55316 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
FOXG1P55316 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FOXG1P55316 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
FOXG1P55316 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
FOXG1P55316 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FOXG1P55316 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.28□□□□□ -1.72
FOXG1P55316 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
FOXG1P55316 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
FOXG1P55316 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.28□□□□□ -1.72
FOXG1P55316 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
FOXG1P55316 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
FOXG1P55316 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
FOXG1P55316 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.27□□□□□ -1.73
FOXG1P55316 RPS4XP5-202ENST00000449995 1334 ntBASIC4.27□□□□□ -1.73
FOXG1P55316 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.27□□□□□ -1.73
FOXG1P55316 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
FOXG1P55316 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
FOXG1P55316 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.27□□□□□ -1.73
FOXG1P55316 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.27□□□□□ -1.73
FOXG1P55316 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
FOXG1P55316 AC005539.1-201ENST00000443768 1479 ntBASIC4.27□□□□□ -1.73
FOXG1P55316 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
FOXG1P55316 OR10J6P-201ENST00000289731 930 ntBASIC4.27□□□□□ -1.73
FOXG1P55316 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
FOXG1P55316 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
FOXG1P55316 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.27□□□□□ -1.73
FOXG1P55316 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXG1P55316 RNU6-549P-201ENST00000384433 107 ntBASIC4.27□□□□□ -1.73
FOXG1P55316 RN7SKP247-201ENST00000411094 308 ntBASIC4.27□□□□□ -1.73
FOXG1P55316 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXG1P55316 NRBF2P2-201ENST00000413087 861 ntBASIC4.27□□□□□ -1.73
FOXG1P55316 HMGB3P31-201ENST00000413333 595 ntBASIC4.27□□□□□ -1.73
FOXG1P55316 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXG1P55316 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.27□□□□□ -1.73
FOXG1P55316 Z97055.1-201ENST00000419730 712 ntBASIC4.27□□□□□ -1.73
FOXG1P55316 MRPS36P1-201ENST00000421291 307 ntBASIC4.27□□□□□ -1.73
FOXG1P55316 AL645608.4-201ENST00000423619 154 ntBASIC4.27□□□□□ -1.73
FOXG1P55316 USP9YP18-201ENST00000425912 695 ntBASIC4.27□□□□□ -1.73
FOXG1P55316 OR5AW1P-201ENST00000426334 1006 ntBASIC4.27□□□□□ -1.73
FOXG1P55316 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXG1P55316 USP12PX-201ENST00000432383 1057 ntBASIC4.27□□□□□ -1.73
FOXG1P55316 AL035458.1-201ENST00000433096 585 ntBASIC4.27□□□□□ -1.73
FOXG1P55316 HMGB1P31-201ENST00000437242 427 ntBASIC4.27□□□□□ -1.73
FOXG1P55316 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.27□□□□□ -1.73
FOXG1P55316 CYCSP24-201ENST00000445119 316 ntBASIC4.27□□□□□ -1.73
FOXG1P55316 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
FOXG1P55316 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
FOXG1P55316 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXG1P55316 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.27□□□□□ -1.73
FOXG1P55316 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.27□□□□□ -1.73
FOXG1P55316 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXG1P55316 TMED11P-201ENST00000479478 690 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms