Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.05□□□□□ -1.76
CDH11P55287 MIR4715-201ENST00000584117 79 ntBASIC4.05□□□□□ -1.76
CDH11P55287 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.05□□□□□ -1.76
CDH11P55287 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.05□□□□□ -1.76
CDH11P55287 AP001269.3-201ENST00000588718 329 ntBASIC4.05□□□□□ -1.76
CDH11P55287 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDH11P55287 AC245036.5-201ENST00000596330 847 ntBASIC4.05□□□□□ -1.76
CDH11P55287 BPIFA4P-203ENST00000603168 689 ntBASIC4.05□□□□□ -1.76
CDH11P55287 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.05□□□□□ -1.76
CDH11P55287 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.05□□□□□ -1.76
CDH11P55287 AC021755.4-201ENST00000616620 456 ntBASIC4.05□□□□□ -1.76
CDH11P55287 Z99129.2-201ENST00000619967 314 ntBASIC4.05□□□□□ -1.76
CDH11P55287 AC013470.4-201ENST00000619978 986 ntBASIC4.05□□□□□ -1.76
CDH11P55287 AC007546.2-201ENST00000623996 360 ntBASIC4.05□□□□□ -1.76
CDH11P55287 U3.53-201ENST00000628922 216 ntBASIC4.05□□□□□ -1.76
CDH11P55287 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDH11P55287 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
CDH11P55287 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDH11P55287 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CDH11P55287 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.05□□□□□ -1.76
CDH11P55287 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDH11P55287 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.05□□□□□ -1.76
CDH11P55287 AL049737.1-201ENST00000413920 1403 ntBASIC4.04□□□□□ -1.76
CDH11P55287 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDH11P55287 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDH11P55287 AP005901.5-201ENST00000545779 1796 ntBASIC4.04□□□□□ -1.76
CDH11P55287 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.04□□□□□ -1.76
CDH11P55287 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDH11P55287 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CDH11P55287 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDH11P55287 AC092162.3-201ENST00000624511 1624 ntBASIC4.04□□□□□ -1.76
CDH11P55287 ZNF137P-201ENST00000456718 1920 ntBASIC4.04□□□□□ -1.76
CDH11P55287 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDH11P55287 RPL32P3-201ENST00000359025 275 ntBASIC4.04□□□□□ -1.76
CDH11P55287 MIR448-201ENST00000362131 111 ntBASIC4.04□□□□□ -1.76
CDH11P55287 SNORA62-201ENST00000365493 153 ntBASIC4.04□□□□□ -1.76
CDH11P55287 OR52E6-202ENST00000379946 954 ntBASIC4.04□□□□□ -1.76
CDH11P55287 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDH11P55287 MIR129-1-201ENST00000384972 72 ntBASIC4.04□□□□□ -1.76
CDH11P55287 HSPD1P16-201ENST00000402302 394 ntBASIC4.04□□□□□ -1.76
CDH11P55287 AC234782.4-201ENST00000417646 1048 ntBASIC4.04□□□□□ -1.76
CDH11P55287 HMGB1P49-201ENST00000418882 569 ntBASIC4.04□□□□□ -1.76
CDH11P55287 UQCRBP1-201ENST00000421129 336 ntBASIC4.04□□□□□ -1.76
CDH11P55287 RAD23BP1-201ENST00000421404 1227 ntBASIC4.04□□□□□ -1.76
CDH11P55287 RPL12P28-201ENST00000430852 489 ntBASIC4.04□□□□□ -1.76
CDH11P55287 AC092013.1-201ENST00000438795 332 ntBASIC4.04□□□□□ -1.76
CDH11P55287 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.04□□□□□ -1.76
CDH11P55287 AC079776.3-201ENST00000450665 370 ntBASIC4.04□□□□□ -1.76
CDH11P55287 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH11P55287 USP9YP25-201ENST00000457708 443 ntBASIC4.04□□□□□ -1.76
CDH11P55287 AC093267.1-201ENST00000489176 961 ntBASIC4.04□□□□□ -1.76
CDH11P55287 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDH11P55287 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.04□□□□□ -1.76
CDH11P55287 AC008885.2-201ENST00000509506 930 ntBASIC4.04□□□□□ -1.76
CDH11P55287 PGBD4P4-201ENST00000509673 613 ntBASIC4.04□□□□□ -1.76
CDH11P55287 IFITM8P-201ENST00000522529 394 ntBASIC4.04□□□□□ -1.76
CDH11P55287 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.04□□□□□ -1.76
CDH11P55287 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.04□□□□□ -1.76
CDH11P55287 AC023538.1-201ENST00000534576 736 ntBASIC4.04□□□□□ -1.76
CDH11P55287 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.04□□□□□ -1.76
CDH11P55287 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.04□□□□□ -1.76
CDH11P55287 AC069240.1-201ENST00000548774 375 ntBASIC4.04□□□□□ -1.76
CDH11P55287 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.04□□□□□ -1.76
CDH11P55287 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.04□□□□□ -1.76
CDH11P55287 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.04□□□□□ -1.76
CDH11P55287 MIR3912-201ENST00000577566 105 ntBASIC4.04□□□□□ -1.76
CDH11P55287 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.04□□□□□ -1.76
CDH11P55287 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH11P55287 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH11P55287 RPL12P25-202ENST00000598100 674 ntBASIC4.04□□□□□ -1.76
CDH11P55287 AL133338.2-201ENST00000604292 736 ntBASIC4.04□□□□□ -1.76
CDH11P55287 AL160290.3-201ENST00000604869 165 ntBASIC4.04□□□□□ -1.76
CDH11P55287 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH11P55287 AC015813.4-201ENST00000610469 179 ntBASIC4.04□□□□□ -1.76
CDH11P55287 AC100847.1-201ENST00000611316 481 ntBASIC4.04□□□□□ -1.76
CDH11P55287 AL731566.2-201ENST00000618971 317 ntBASIC4.04□□□□□ -1.76
CDH11P55287 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.04□□□□□ -1.76
CDH11P55287 AC019226.2-201ENST00000625973 424 ntBASIC4.04□□□□□ -1.76
CDH11P55287 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.04□□□□□ -1.76
CDH11P55287 AC074029.4-201ENST00000624796 1859 ntBASIC4.04□□□□□ -1.76
CDH11P55287 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CDH11P55287 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CDH11P55287 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDH11P55287 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CDH11P55287 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.04□□□□□ -1.76
CDH11P55287 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.04□□□□□ -1.76
CDH11P55287 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDH11P55287 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.04□□□□□ -1.76
CDH11P55287 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDH11P55287 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CDH11P55287 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
CDH11P55287 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDH11P55287 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CDH11P55287 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDH11P55287 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CDH11P55287 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CDH11P55287 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CDH11P55287 SNORA51.12-201ENST00000384448 134 ntBASIC4.03□□□□□ -1.76
CDH11P55287 MIR217-201ENST00000384817 110 ntBASIC4.03□□□□□ -1.76
CDH11P55287 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms