Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NR1H2P55055 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NR1H2P55055 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NR1H2P55055 FAM91A3P-201ENST00000456826 2544 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
NR1H2P55055 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
NR1H2P55055 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
NR1H2P55055 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
NR1H2P55055 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.56□□□□□ -1.68
NR1H2P55055 ZNF37BP-203ENST00000452306 1352 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
NR1H2P55055 AC068254.2-201ENST00000623938 3577 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.56□□□□□ -1.68
NR1H2P55055 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NR1H2P55055 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.56□□□□□ -1.68
NR1H2P55055 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NR1H2P55055 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
NR1H2P55055 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NR1H2P55055 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.56□□□□□ -1.68
NR1H2P55055 SNORA73.1-201ENST00000363107 205 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 SNORA2.3-201ENST00000383920 135 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NR1H2P55055 AL590084.1-201ENST00000407885 387 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 LUZP4P1-201ENST00000415420 344 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.56□□□□□ -1.68
NR1H2P55055 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.56□□□□□ -1.68
NR1H2P55055 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.56□□□□□ -1.68
NR1H2P55055 AC104837.2-201ENST00000427236 424 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.56□□□□□ -1.68
NR1H2P55055 HIGD1AP4-201ENST00000430194 280 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 AC092162.1-201ENST00000432828 434 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 AC004938.1-201ENST00000438468 308 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 RPL23AP33-201ENST00000442301 452 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 AC009220.1-201ENST00000451614 275 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 HIGD1AP8-201ENST00000453927 274 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 AC097484.1-201ENST00000471148 389 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.56□□□□□ -1.68
NR1H2P55055 AC012170.1-201ENST00000495139 359 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 HMGB3P13-201ENST00000511263 607 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 PTGES3P3-201ENST00000511479 482 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.56□□□□□ -1.68
NR1H2P55055 AC004980.4-201ENST00000513375 203 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 RNA5SP154-201ENST00000516193 111 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.56□□□□□ -1.68
NR1H2P55055 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.56□□□□□ -1.68
NR1H2P55055 OR4R3P-201ENST00000525084 838 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 UBTFL10-201ENST00000528532 562 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
NR1H2P55055 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.56□□□□□ -1.68
NR1H2P55055 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NR1H2P55055 AC069240.1-201ENST00000548774 375 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.56□□□□□ -1.68
NR1H2P55055 AC087477.6-201ENST00000559595 843 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 AC138915.2-201ENST00000569776 97 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.56□□□□□ -1.68
NR1H2P55055 OR4G1P-201ENST00000588632 938 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.56□□□□□ -1.68
NR1H2P55055 MRPS35P3-201ENST00000603189 709 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 AC004987.4-201ENST00000603383 338 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 AC009220.3-201ENST00000604318 586 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 AC087783.2-201ENST00000605070 562 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 AC091946.2-201ENST00000606105 291 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 AP000484.1-201ENST00000620067 1252 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 MIR6810-201ENST00000622701 70 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 AC073348.1-201ENST00000623002 331 ntBASIC4.56□□□□□ -1.68
NR1H2P55055 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.56□□□□□ -1.68
NR1H2P55055 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.56□□□□□ -1.68
NR1H2P55055 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
NR1H2P55055 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NR1H2P55055 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
NR1H2P55055 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.56□□□□□ -1.68
NR1H2P55055 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 AC009643.2-201ENST00000603543 1448 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 AC090337.1-201ENST00000579651 2074 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.55□□□□□ -1.68
NR1H2P55055 IQCB2P-201ENST00000401788 1633 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
NR1H2P55055 RNA5SP123-201ENST00000363244 119 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 RNU5D-1-201ENST00000363299 116 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 SNORA51.8-201ENST00000384234 132 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 CYB5AP4-201ENST00000396692 399 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 MIR921-201ENST00000401133 56 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.55□□□□□ -1.68
NR1H2P55055 RNU2-42P-201ENST00000410697 113 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 NRBF2P2-201ENST00000413087 861 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 ELOCP9-201ENST00000418624 239 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.55□□□□□ -1.68
NR1H2P55055 AC092017.2-201ENST00000427600 362 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 RPS27AP12-201ENST00000429552 465 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.55□□□□□ -1.68
NR1H2P55055 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.55□□□□□ -1.68
NR1H2P55055 RPL21P133-201ENST00000443666 476 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 AL590399.6-201ENST00000446396 307 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 MTCYBP11-201ENST00000447254 1109 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 AL691482.1-201ENST00000453255 87 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 RPS17P2-201ENST00000461663 408 ntBASIC4.55□□□□□ -1.68
NR1H2P55055 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.55□□□□□ -1.68
NR1H2P55055 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms