Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.97□□□□□ -1.61
COPAP53621 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COPAP53621 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
COPAP53621 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
COPAP53621 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COPAP53621 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
COPAP53621 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
COPAP53621 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
COPAP53621 AL445487.1-201ENST00000415694 1580 ntBASIC4.96□□□□□ -1.62
COPAP53621 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
COPAP53621 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.96□□□□□ -1.62
COPAP53621 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COPAP53621 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.96□□□□□ -1.62
COPAP53621 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.96□□□□□ -1.62
COPAP53621 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.96□□□□□ -1.62
COPAP53621 Y_RNA.408-201ENST00000383987 102 ntBASIC4.96□□□□□ -1.62
COPAP53621 SNORD116-1-201ENST00000384335 95 ntBASIC4.96□□□□□ -1.62
COPAP53621 ATP5F1P3-201ENST00000397213 657 ntBASIC4.96□□□□□ -1.62
COPAP53621 AL136133.1-201ENST00000413694 376 ntBASIC4.96□□□□□ -1.62
COPAP53621 AL513175.1-201ENST00000431492 780 ntBASIC4.96□□□□□ -1.62
COPAP53621 AL050321.1-201ENST00000432363 400 ntBASIC4.96□□□□□ -1.62
COPAP53621 MTND4P32-201ENST00000437189 1237 ntBASIC4.96□□□□□ -1.62
COPAP53621 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.96□□□□□ -1.62
COPAP53621 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.96□□□□□ -1.62
COPAP53621 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.96□□□□□ -1.62
COPAP53621 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.96□□□□□ -1.62
COPAP53621 AC010733.1-201ENST00000451515 401 ntBASIC4.96□□□□□ -1.62
COPAP53621 AL109741.2-201ENST00000455561 343 ntBASIC4.96□□□□□ -1.62
COPAP53621 AL445433.1-201ENST00000457507 257 ntBASIC4.96□□□□□ -1.62
COPAP53621 RPS17P2-201ENST00000461663 408 ntBASIC4.96□□□□□ -1.62
COPAP53621 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
COPAP53621 RPL21P71-201ENST00000465598 459 ntBASIC4.96□□□□□ -1.62
COPAP53621 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COPAP53621 LINC00888-204ENST00000487386 421 ntBASIC4.96□□□□□ -1.62
COPAP53621 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.96□□□□□ -1.62
COPAP53621 RN7SKP276-201ENST00000516242 268 ntBASIC4.96□□□□□ -1.62
COPAP53621 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.96□□□□□ -1.62
COPAP53621 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.96□□□□□ -1.62
COPAP53621 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.96□□□□□ -1.62
COPAP53621 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.96□□□□□ -1.62
COPAP53621 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.96□□□□□ -1.62
COPAP53621 DEFB109D-201ENST00000529497 240 ntBASIC4.96□□□□□ -1.62
COPAP53621 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.96□□□□□ -1.62
COPAP53621 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.96□□□□□ -1.62
COPAP53621 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.96□□□□□ -1.62
COPAP53621 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.96□□□□□ -1.62
COPAP53621 AC010857.1-201ENST00000606398 594 ntBASIC4.96□□□□□ -1.62
COPAP53621 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.96□□□□□ -1.62
COPAP53621 AC005332.6-201ENST00000613178 446 ntBASIC4.96□□□□□ -1.62
COPAP53621 AC073348.1-201ENST00000623002 331 ntBASIC4.96□□□□□ -1.62
COPAP53621 AC139792.2-201ENST00000624218 587 ntBASIC4.96□□□□□ -1.62
COPAP53621 CR381572.2-201ENST00000624852 397 ntBASIC4.96□□□□□ -1.62
COPAP53621 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.96□□□□□ -1.62
COPAP53621 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
COPAP53621 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.96□□□□□ -1.62
COPAP53621 AC090229.1-201ENST00000590983 1609 ntBASIC4.96□□□□□ -1.62
COPAP53621 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
COPAP53621 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.96□□□□□ -1.62
COPAP53621 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COPAP53621 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.96□□□□□ -1.62
COPAP53621 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
COPAP53621 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
COPAP53621 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.95□□□□□ -1.62
COPAP53621 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.95□□□□□ -1.62
COPAP53621 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COPAP53621 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.95□□□□□ -1.62
COPAP53621 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COPAP53621 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
COPAP53621 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
COPAP53621 HNRNPDP2-201ENST00000406475 478 ntBASIC4.95□□□□□ -1.62
COPAP53621 AC233981.1-201ENST00000423224 461 ntBASIC4.95□□□□□ -1.62
COPAP53621 BX119904.4-201ENST00000424402 301 ntBASIC4.95□□□□□ -1.62
COPAP53621 OR2B7P-201ENST00000429302 934 ntBASIC4.95□□□□□ -1.62
COPAP53621 AC005345.1-201ENST00000431868 217 ntBASIC4.95□□□□□ -1.62
COPAP53621 NRBF2P3-201ENST00000432731 865 ntBASIC4.95□□□□□ -1.62
COPAP53621 AC010881.1-201ENST00000433830 235 ntBASIC4.95□□□□□ -1.62
COPAP53621 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
COPAP53621 AC005154.2-201ENST00000438110 379 ntBASIC4.95□□□□□ -1.62
COPAP53621 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.95□□□□□ -1.62
COPAP53621 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.95□□□□□ -1.62
COPAP53621 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.95□□□□□ -1.62
COPAP53621 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.95□□□□□ -1.62
COPAP53621 RPL12P26-201ENST00000452430 487 ntBASIC4.95□□□□□ -1.62
COPAP53621 AL691482.1-201ENST00000453255 87 ntBASIC4.95□□□□□ -1.62
COPAP53621 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.95□□□□□ -1.62
COPAP53621 RNU7-125P-201ENST00000458760 62 ntBASIC4.95□□□□□ -1.62
COPAP53621 RPS3AP43-201ENST00000479743 781 ntBASIC4.95□□□□□ -1.62
COPAP53621 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.95□□□□□ -1.62
COPAP53621 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
COPAP53621 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COPAP53621 AC025674.1-201ENST00000507074 324 ntBASIC4.95□□□□□ -1.62
COPAP53621 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.95□□□□□ -1.62
COPAP53621 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COPAP53621 MTND1P22-201ENST00000510572 951 ntBASIC4.95□□□□□ -1.62
COPAP53621 RAB9BP1-201ENST00000519581 626 ntBASIC4.95□□□□□ -1.62
COPAP53621 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.95□□□□□ -1.62
COPAP53621 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.95□□□□□ -1.62
COPAP53621 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
COPAP53621 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.95□□□□□ -1.62
COPAP53621 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms