Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 CEP170P1-201ENST00000502249 4587 ntBASIC4.87□□□□□ -1.63
MSH6P52701 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
MSH6P52701 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
MSH6P52701 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
MSH6P52701 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.87□□□□□ -1.63
MSH6P52701 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.87□□□□□ -1.63
MSH6P52701 FTLP6-201ENST00000355274 422 ntBASIC4.87□□□□□ -1.63
MSH6P52701 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
MSH6P52701 RNU6-167P-201ENST00000384292 106 ntBASIC4.87□□□□□ -1.63
MSH6P52701 SNORA44-201ENST00000384584 132 ntBASIC4.87□□□□□ -1.63
MSH6P52701 AL691447.1-201ENST00000419456 387 ntBASIC4.87□□□□□ -1.63
MSH6P52701 OR5AW1P-201ENST00000426334 1006 ntBASIC4.87□□□□□ -1.63
MSH6P52701 NANOGP6-201ENST00000429190 847 ntBASIC4.87□□□□□ -1.63
MSH6P52701 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.87□□□□□ -1.63
MSH6P52701 HMGB3P22-202ENST00000451823 572 ntBASIC4.87□□□□□ -1.63
MSH6P52701 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.87□□□□□ -1.63
MSH6P52701 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
MSH6P52701 AC138409.2-202ENST00000507274 458 ntBASIC4.87□□□□□ -1.63
MSH6P52701 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.87□□□□□ -1.63
MSH6P52701 MRPS35P3-201ENST00000603189 709 ntBASIC4.87□□□□□ -1.63
MSH6P52701 AP003392.5-201ENST00000607857 415 ntBASIC4.87□□□□□ -1.63
MSH6P52701 AC007998.5-201ENST00000622938 237 ntBASIC4.87□□□□□ -1.63
MSH6P52701 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.87□□□□□ -1.63
MSH6P52701 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
MSH6P52701 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
MSH6P52701 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
MSH6P52701 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
MSH6P52701 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
MSH6P52701 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.86□□□□□ -1.63
MSH6P52701 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.86□□□□□ -1.63
MSH6P52701 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
MSH6P52701 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
MSH6P52701 MIR422A-201ENST00000362286 90 ntBASIC4.86□□□□□ -1.63
MSH6P52701 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
MSH6P52701 AC013268.2-201ENST00000420753 337 ntBASIC4.86□□□□□ -1.63
MSH6P52701 AL353678.1-201ENST00000422735 741 ntBASIC4.86□□□□□ -1.63
MSH6P52701 ATP5HP2-201ENST00000433885 485 ntBASIC4.86□□□□□ -1.63
MSH6P52701 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.86□□□□□ -1.63
MSH6P52701 DNAJC19P8-201ENST00000452887 259 ntBASIC4.86□□□□□ -1.63
MSH6P52701 AC099563.1-201ENST00000456086 418 ntBASIC4.86□□□□□ -1.63
MSH6P52701 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.86□□□□□ -1.63
MSH6P52701 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.86□□□□□ -1.63
MSH6P52701 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.86□□□□□ -1.63
MSH6P52701 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.86□□□□□ -1.63
MSH6P52701 FCF1P8-201ENST00000510322 597 ntBASIC4.86□□□□□ -1.63
MSH6P52701 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.86□□□□□ -1.63
MSH6P52701 HNRNPKP5-201ENST00000515300 253 ntBASIC4.86□□□□□ -1.63
MSH6P52701 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.86□□□□□ -1.63
MSH6P52701 OR1AB1P-201ENST00000585564 761 ntBASIC4.86□□□□□ -1.63
MSH6P52701 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.86□□□□□ -1.63
MSH6P52701 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
MSH6P52701 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.86□□□□□ -1.63
MSH6P52701 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.86□□□□□ -1.63
MSH6P52701 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
MSH6P52701 TTC39DP-201ENST00000416781 1688 ntBASIC4.86□□□□□ -1.63
MSH6P52701 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.86□□□□□ -1.63
MSH6P52701 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
MSH6P52701 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.85□□□□□ -1.63
MSH6P52701 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.85□□□□□ -1.63
MSH6P52701 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.85□□□□□ -1.63
MSH6P52701 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.85□□□□□ -1.63
MSH6P52701 MIR3945-201ENST00000581853 98 ntBASIC4.85□□□□□ -1.63
MSH6P52701 AC006539.2-201ENST00000601729 572 ntBASIC4.85□□□□□ -1.63
MSH6P52701 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.85□□□□□ -1.63
MSH6P52701 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
MSH6P52701 AL645937.1-201ENST00000641739 1652 ntBASIC4.85□□□□□ -1.63
MSH6P52701 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
MSH6P52701 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
MSH6P52701 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.85□□□□□ -1.63
MSH6P52701 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
MSH6P52701 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
MSH6P52701 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
MSH6P52701 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
MSH6P52701 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
MSH6P52701 FRG1CP-201ENST00000358464 769 ntBASIC4.84□□□□□ -1.63
MSH6P52701 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
MSH6P52701 AL139095.1-201ENST00000404326 391 ntBASIC4.84□□□□□ -1.63
MSH6P52701 AL138885.1-201ENST00000405921 675 ntBASIC4.84□□□□□ -1.63
MSH6P52701 RNU4-47P-201ENST00000410876 114 ntBASIC4.84□□□□□ -1.63
MSH6P52701 RN7SKP247-201ENST00000411094 308 ntBASIC4.84□□□□□ -1.63
MSH6P52701 RN7SKP53-201ENST00000411337 315 ntBASIC4.84□□□□□ -1.63
MSH6P52701 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.84□□□□□ -1.63
MSH6P52701 AC004552.1-201ENST00000419089 348 ntBASIC4.84□□□□□ -1.63
MSH6P52701 PTP4A1P3-201ENST00000433661 420 ntBASIC4.84□□□□□ -1.63
MSH6P52701 RPS26P3-201ENST00000470205 348 ntBASIC4.84□□□□□ -1.63
MSH6P52701 AC090543.2-201ENST00000483963 348 ntBASIC4.84□□□□□ -1.63
MSH6P52701 AC004057.1-201ENST00000485827 348 ntBASIC4.84□□□□□ -1.63
MSH6P52701 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.84□□□□□ -1.63
MSH6P52701 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.84□□□□□ -1.63
MSH6P52701 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
MSH6P52701 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.84□□□□□ -1.63
MSH6P52701 OR2AS2P-201ENST00000606902 342 ntBASIC4.84□□□□□ -1.63
MSH6P52701 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.84□□□□□ -1.63
MSH6P52701 AC233309.1-201ENST00000619522 751 ntBASIC4.84□□□□□ -1.63
MSH6P52701 AL359757.2-201ENST00000624309 274 ntBASIC4.84□□□□□ -1.63
MSH6P52701 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.84□□□□□ -1.63
MSH6P52701 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
MSH6P52701 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.84□□□□□ -1.64
MSH6P52701 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.84□□□□□ -1.64
MSH6P52701 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms