Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.01□□□□□ -1.61
NEK3P51956 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.01□□□□□ -1.61
NEK3P51956 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.01□□□□□ -1.61
NEK3P51956 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.01□□□□□ -1.61
NEK3P51956 RPL23AP33-201ENST00000442301 452 ntBASIC5.01□□□□□ -1.61
NEK3P51956 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.01□□□□□ -1.61
NEK3P51956 AL590399.6-201ENST00000446396 307 ntBASIC5.01□□□□□ -1.61
NEK3P51956 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.01□□□□□ -1.61
NEK3P51956 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.01□□□□□ -1.61
NEK3P51956 USP9YP10-201ENST00000454868 628 ntBASIC5.01□□□□□ -1.61
NEK3P51956 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.01□□□□□ -1.61
NEK3P51956 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.01□□□□□ -1.61
NEK3P51956 GAPDHP56-201ENST00000506031 988 ntBASIC5.01□□□□□ -1.61
NEK3P51956 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.01□□□□□ -1.61
NEK3P51956 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.01□□□□□ -1.61
NEK3P51956 USP9YP5-201ENST00000511770 630 ntBASIC5.01□□□□□ -1.61
NEK3P51956 RN7SKP46-201ENST00000515942 234 ntBASIC5.01□□□□□ -1.61
NEK3P51956 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.01□□□□□ -1.61
NEK3P51956 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
NEK3P51956 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.01□□□□□ -1.61
NEK3P51956 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.01□□□□□ -1.61
NEK3P51956 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.01□□□□□ -1.61
NEK3P51956 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.01□□□□□ -1.61
NEK3P51956 BGLT3-201ENST00000564523 994 ntBASIC5.01□□□□□ -1.61
NEK3P51956 AC005412.1-201ENST00000580812 1049 ntBASIC5.01□□□□□ -1.61
NEK3P51956 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.01□□□□□ -1.61
NEK3P51956 RPL23AP92-201ENST00000603609 255 ntBASIC5.01□□□□□ -1.61
NEK3P51956 AL031320.1-201ENST00000604177 357 ntBASIC5.01□□□□□ -1.61
NEK3P51956 AC006270.3-201ENST00000605967 1036 ntBASIC5.01□□□□□ -1.61
NEK3P51956 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.01□□□□□ -1.61
NEK3P51956 AC243773.3-201ENST00000613270 256 ntBASIC5.01□□□□□ -1.61
NEK3P51956 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.01□□□□□ -1.61
NEK3P51956 OR6C71P-202ENST00000641886 1107 ntBASIC5.01□□□□□ -1.61
NEK3P51956 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
NEK3P51956 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.01□□□□□ -1.61
NEK3P51956 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NEK3P51956 AL356489.2-201ENST00000566968 3528 ntBASIC5.01□□□□□ -1.61
NEK3P51956 AC099654.2-201ENST00000433031 1980 ntBASIC5□□□□□ -1.61
NEK3P51956 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5□□□□□ -1.61
NEK3P51956 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5□□□□□ -1.61
NEK3P51956 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
NEK3P51956 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5□□□□□ -1.61
NEK3P51956 CD2-201ENST00000369477 478 ntTSL 2 BASIC5□□□□□ -1.61
NEK3P51956 RNA5SP87-201ENST00000384155 118 ntBASIC5□□□□□ -1.61
NEK3P51956 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5□□□□□ -1.61
NEK3P51956 AP000580.1-201ENST00000404439 358 ntBASIC5□□□□□ -1.61
NEK3P51956 MIR1284-201ENST00000408337 120 ntBASIC5□□□□□ -1.61
NEK3P51956 RPL37P18-201ENST00000411602 243 ntBASIC5□□□□□ -1.61
NEK3P51956 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NEK3P51956 E2F6P2-201ENST00000420708 748 ntBASIC5□□□□□ -1.61
NEK3P51956 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5□□□□□ -1.61
NEK3P51956 RPS27AP12-201ENST00000429552 465 ntBASIC5□□□□□ -1.61
NEK3P51956 FABP7P2-201ENST00000429946 379 ntBASIC5□□□□□ -1.61
NEK3P51956 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5□□□□□ -1.61
NEK3P51956 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5□□□□□ -1.61
NEK3P51956 RPS6P15-201ENST00000431996 751 ntBASIC5□□□□□ -1.61
NEK3P51956 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5□□□□□ -1.61
NEK3P51956 AL049745.1-201ENST00000433953 286 ntBASIC5□□□□□ -1.61
NEK3P51956 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5□□□□□ -1.61
NEK3P51956 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5□□□□□ -1.61
NEK3P51956 AC104978.1-201ENST00000449387 391 ntBASIC5□□□□□ -1.61
NEK3P51956 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5□□□□□ -1.61
NEK3P51956 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5□□□□□ -1.61
NEK3P51956 CYCSP34-201ENST00000458172 304 ntBASIC5□□□□□ -1.61
NEK3P51956 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5□□□□□ -1.61
NEK3P51956 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5□□□□□ -1.61
NEK3P51956 OR4G11P-201ENST00000492842 939 ntBASIC5□□□□□ -1.61
NEK3P51956 AC105233.1-201ENST00000498840 781 ntBASIC5□□□□□ -1.61
NEK3P51956 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5□□□□□ -1.61
NEK3P51956 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5□□□□□ -1.61
NEK3P51956 MRPS33P2-201ENST00000507850 322 ntBASIC5□□□□□ -1.61
NEK3P51956 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5□□□□□ -1.61
NEK3P51956 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5□□□□□ -1.61
NEK3P51956 CDH12P4-201ENST00000517835 295 ntBASIC5□□□□□ -1.61
NEK3P51956 CDH12P3-201ENST00000517935 295 ntBASIC5□□□□□ -1.61
NEK3P51956 CDH12P1-201ENST00000518435 295 ntBASIC5□□□□□ -1.61
NEK3P51956 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5□□□□□ -1.61
NEK3P51956 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5□□□□□ -1.61
NEK3P51956 GCSHP4-201ENST00000538792 439 ntBASIC5□□□□□ -1.61
NEK3P51956 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5□□□□□ -1.61
NEK3P51956 AL031281.1-201ENST00000604049 488 ntBASIC5□□□□□ -1.61
NEK3P51956 AC009318.4-201ENST00000620496 486 ntBASIC5□□□□□ -1.61
NEK3P51956 AC019206.1-201ENST00000621938 425 ntBASIC5□□□□□ -1.61
NEK3P51956 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5□□□□□ -1.61
NEK3P51956 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5□□□□□ -1.61
NEK3P51956 CYP3A51P-201ENST00000633513 256 ntBASIC5□□□□□ -1.61
NEK3P51956 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
NEK3P51956 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
NEK3P51956 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5□□□□□ -1.61
NEK3P51956 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5□□□□□ -1.61
NEK3P51956 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
NEK3P51956 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5□□□□□ -1.61
NEK3P51956 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
NEK3P51956 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5□□□□□ -1.61
NEK3P51956 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NEK3P51956 AC090337.1-201ENST00000579651 2074 ntBASIC5□□□□□ -1.61
NEK3P51956 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.99□□□□□ -1.61
NEK3P51956 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
NEK3P51956 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NEK3P51956 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms