Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 VPS26AP1-201ENST00000483197 979 ntBASIC6.63□□□□□ -1.35
RXRBP28702 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RXRBP28702 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.63□□□□□ -1.35
RXRBP28702 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC6.63□□□□□ -1.35
RXRBP28702 RNU6-358P-201ENST00000516564 75 ntBASIC6.63□□□□□ -1.35
RXRBP28702 MRPL49P2-201ENST00000521066 465 ntBASIC6.63□□□□□ -1.35
RXRBP28702 AC005832.3-201ENST00000537929 631 ntBASIC6.63□□□□□ -1.35
RXRBP28702 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RXRBP28702 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC6.63□□□□□ -1.35
RXRBP28702 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC6.63□□□□□ -1.35
RXRBP28702 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC6.63□□□□□ -1.35
RXRBP28702 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC6.63□□□□□ -1.35
RXRBP28702 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC6.63□□□□□ -1.35
RXRBP28702 AP001542.2-201ENST00000593141 364 ntBASIC6.63□□□□□ -1.35
RXRBP28702 AC131902.3-201ENST00000611767 581 ntBASIC6.63□□□□□ -1.35
RXRBP28702 AC135507.2-201ENST00000612443 309 ntBASIC6.63□□□□□ -1.35
RXRBP28702 AC018628.1-201ENST00000624147 3819 ntBASIC6.63□□□□□ -1.35
RXRBP28702 TEX41-256ENST00000626411 368 ntTSL 5 BASIC6.63□□□□□ -1.35
RXRBP28702 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC6.63□□□□□ -1.35
RXRBP28702 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RXRBP28702 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RXRBP28702 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RXRBP28702 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
RXRBP28702 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
RXRBP28702 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.62□□□□□ -1.35
RXRBP28702 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RXRBP28702 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RXRBP28702 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RXRBP28702 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.62□□□□□ -1.35
RXRBP28702 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RXRBP28702 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RXRBP28702 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RXRBP28702 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RXRBP28702 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RXRBP28702 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RXRBP28702 METTL21EP-201ENST00000298105 713 ntBASIC6.62□□□□□ -1.35
RXRBP28702 SNORA71.3-201ENST00000362582 128 ntBASIC6.62□□□□□ -1.35
RXRBP28702 RNU6-621P-201ENST00000364752 109 ntBASIC6.62□□□□□ -1.35
RXRBP28702 RNU1-59P-201ENST00000364829 162 ntBASIC6.62□□□□□ -1.35
RXRBP28702 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RXRBP28702 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
RXRBP28702 MT-TD-201ENST00000387419 68 ntBASIC6.62□□□□□ -1.35
RXRBP28702 RN7SKP56-201ENST00000410513 331 ntBASIC6.62□□□□□ -1.35
RXRBP28702 RPS20P15-201ENST00000412792 311 ntBASIC6.62□□□□□ -1.35
RXRBP28702 C1DP2-201ENST00000418167 426 ntBASIC6.62□□□□□ -1.35
RXRBP28702 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC6.62□□□□□ -1.35
RXRBP28702 UQCRBP1-201ENST00000421129 336 ntBASIC6.62□□□□□ -1.35
RXRBP28702 FHP1-201ENST00000442741 703 ntBASIC6.62□□□□□ -1.35
RXRBP28702 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC6.62□□□□□ -1.35
RXRBP28702 PRSS3P4-201ENST00000453323 162 ntBASIC6.62□□□□□ -1.35
RXRBP28702 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC6.62□□□□□ -1.35
RXRBP28702 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC6.62□□□□□ -1.35
RXRBP28702 RPL23AP24-201ENST00000458203 385 ntBASIC6.62□□□□□ -1.35
RXRBP28702 RPS4XP12-201ENST00000461747 709 ntBASIC6.62□□□□□ -1.35
RXRBP28702 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC6.62□□□□□ -1.35
RXRBP28702 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.62□□□□□ -1.35
RXRBP28702 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC6.62□□□□□ -1.35
RXRBP28702 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC6.62□□□□□ -1.35
RXRBP28702 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC6.62□□□□□ -1.35
RXRBP28702 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.62□□□□□ -1.35
RXRBP28702 AC006960.3-201ENST00000561845 705 ntBASIC6.62□□□□□ -1.35
RXRBP28702 AC084783.1-201ENST00000565846 910 ntBASIC6.62□□□□□ -1.35
RXRBP28702 AC069061.3-201ENST00000582254 823 ntBASIC6.62□□□□□ -1.35
RXRBP28702 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RXRBP28702 DUXAP4-201ENST00000603046 613 ntBASIC6.62□□□□□ -1.35
RXRBP28702 AP000942.4-201ENST00000604811 241 ntBASIC6.62□□□□□ -1.35
RXRBP28702 AL121655.1-201ENST00000605811 308 ntBASIC6.62□□□□□ -1.35
RXRBP28702 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC6.62□□□□□ -1.35
RXRBP28702 AC055764.2-201ENST00000610089 670 ntBASIC6.62□□□□□ -1.35
RXRBP28702 AC093838.1-201ENST00000613014 469 ntBASIC6.62□□□□□ -1.35
RXRBP28702 U1.25-201ENST00000614085 162 ntBASIC6.62□□□□□ -1.35
RXRBP28702 AC091834.1-201ENST00000614543 472 ntBASIC6.62□□□□□ -1.35
RXRBP28702 AL031658.2-201ENST00000616850 651 ntBASIC6.62□□□□□ -1.35
RXRBP28702 U1.34-201ENST00000618578 162 ntBASIC6.62□□□□□ -1.35
RXRBP28702 U1.31-201ENST00000620022 160 ntBASIC6.62□□□□□ -1.35
RXRBP28702 AC124864.2-201ENST00000624736 186 ntBASIC6.62□□□□□ -1.35
RXRBP28702 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
RXRBP28702 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
RXRBP28702 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RXRBP28702 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
RXRBP28702 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
RXRBP28702 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RXRBP28702 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RXRBP28702 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RXRBP28702 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RXRBP28702 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.61□□□□□ -1.35
RXRBP28702 AP000432.2-201ENST00000624164 2048 ntBASIC6.61□□□□□ -1.35
RXRBP28702 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
RXRBP28702 SNORA4.1-201ENST00000364263 144 ntBASIC6.61□□□□□ -1.35
RXRBP28702 Y_RNA.263-201ENST00000364659 114 ntBASIC6.61□□□□□ -1.35
RXRBP28702 CYCSP45-201ENST00000402289 315 ntBASIC6.61□□□□□ -1.35
RXRBP28702 LINC01347-201ENST00000417964 355 ntBASIC6.61□□□□□ -1.35
RXRBP28702 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC6.61□□□□□ -1.35
RXRBP28702 AF228730.4-201ENST00000421457 183 ntBASIC6.61□□□□□ -1.35
RXRBP28702 OR10T1P-201ENST00000424327 947 ntBASIC6.61□□□□□ -1.35
RXRBP28702 YWHAEP5-201ENST00000431545 765 ntBASIC6.61□□□□□ -1.35
RXRBP28702 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC6.61□□□□□ -1.35
RXRBP28702 RPL23AP56-201ENST00000460778 453 ntBASIC6.61□□□□□ -1.35
RXRBP28702 RN7SL303P-201ENST00000469773 251 ntBASIC6.61□□□□□ -1.35
RXRBP28702 RN7SL188P-201ENST00000469842 285 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms