Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.66□□□□□ -1.34
RFX1P22670 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
RFX1P22670 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
RFX1P22670 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.66□□□□□ -1.34
RFX1P22670 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RFX1P22670 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RFX1P22670 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
RFX1P22670 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
RFX1P22670 RNU6-97P-201ENST00000363387 104 ntBASIC6.66□□□□□ -1.34
RFX1P22670 RNA5SP284-201ENST00000384547 118 ntBASIC6.66□□□□□ -1.34
RFX1P22670 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
RFX1P22670 AL096800.1-201ENST00000405326 893 ntBASIC6.66□□□□□ -1.34
RFX1P22670 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC6.66□□□□□ -1.34
RFX1P22670 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.66□□□□□ -1.34
RFX1P22670 ELOCP4-201ENST00000420090 333 ntBASIC6.66□□□□□ -1.34
RFX1P22670 NME1P1-201ENST00000420914 382 ntBASIC6.66□□□□□ -1.34
RFX1P22670 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.66□□□□□ -1.34
RFX1P22670 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC6.66□□□□□ -1.34
RFX1P22670 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6.66□□□□□ -1.34
RFX1P22670 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC6.66□□□□□ -1.34
RFX1P22670 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.66□□□□□ -1.34
RFX1P22670 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.66□□□□□ -1.34
RFX1P22670 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.66□□□□□ -1.34
RFX1P22670 AC021382.1-201ENST00000483523 359 ntBASIC6.66□□□□□ -1.34
RFX1P22670 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC6.66□□□□□ -1.34
RFX1P22670 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.66□□□□□ -1.34
RFX1P22670 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.66□□□□□ -1.34
RFX1P22670 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC6.66□□□□□ -1.34
RFX1P22670 RNU6-1153P-201ENST00000516760 105 ntBASIC6.66□□□□□ -1.34
RFX1P22670 Y_RNA.701-201ENST00000516812 110 ntBASIC6.66□□□□□ -1.34
RFX1P22670 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC6.66□□□□□ -1.34
RFX1P22670 AP003396.4-201ENST00000527574 265 ntBASIC6.66□□□□□ -1.34
RFX1P22670 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC6.66□□□□□ -1.34
RFX1P22670 AC092470.1-201ENST00000546187 132 ntBASIC6.66□□□□□ -1.34
RFX1P22670 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.66□□□□□ -1.34
RFX1P22670 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC6.66□□□□□ -1.34
RFX1P22670 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.66□□□□□ -1.34
RFX1P22670 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC6.66□□□□□ -1.34
RFX1P22670 UBE2L4-201ENST00000587688 464 ntBASIC6.66□□□□□ -1.34
RFX1P22670 AC008782.1-201ENST00000603386 430 ntBASIC6.66□□□□□ -1.34
RFX1P22670 AC013244.1-201ENST00000604279 193 ntBASIC6.66□□□□□ -1.34
RFX1P22670 OR6R2P-201ENST00000609216 300 ntBASIC6.66□□□□□ -1.34
RFX1P22670 AC135507.2-201ENST00000612443 309 ntBASIC6.66□□□□□ -1.34
RFX1P22670 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.66□□□□□ -1.34
RFX1P22670 AC024884.1-201ENST00000620583 399 ntBASIC6.66□□□□□ -1.34
RFX1P22670 AC069234.4-201ENST00000621276 412 ntBASIC6.66□□□□□ -1.34
RFX1P22670 AL158801.5-201ENST00000623123 465 ntBASIC6.66□□□□□ -1.34
RFX1P22670 AC112204.3-201ENST00000623822 332 ntBASIC6.66□□□□□ -1.34
RFX1P22670 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.66□□□□□ -1.34
RFX1P22670 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RFX1P22670 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RFX1P22670 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
RFX1P22670 AL137141.1-201ENST00000624622 4836 ntBASIC6.65□□□□□ -1.34
RFX1P22670 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.65□□□□□ -1.34
RFX1P22670 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.65□□□□□ -1.34
RFX1P22670 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RFX1P22670 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RFX1P22670 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RFX1P22670 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
RFX1P22670 RPL7P58-201ENST00000402913 758 ntBASIC6.65□□□□□ -1.34
RFX1P22670 AC211486.3-201ENST00000412694 621 ntBASIC6.65□□□□□ -1.34
RFX1P22670 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC6.65□□□□□ -1.34
RFX1P22670 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.65□□□□□ -1.34
RFX1P22670 RGS17P1-201ENST00000423358 553 ntBASIC6.65□□□□□ -1.34
RFX1P22670 AC245884.2-201ENST00000426257 404 ntBASIC6.65□□□□□ -1.34
RFX1P22670 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC6.65□□□□□ -1.34
RFX1P22670 AC094019.1-201ENST00000434678 472 ntBASIC6.65□□□□□ -1.34
RFX1P22670 GAPDHP48-201ENST00000436626 961 ntBASIC6.65□□□□□ -1.34
RFX1P22670 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
RFX1P22670 OR3D1P-201ENST00000438288 955 ntBASIC6.65□□□□□ -1.34
RFX1P22670 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC6.65□□□□□ -1.34
RFX1P22670 AC097463.1-201ENST00000447288 481 ntBASIC6.65□□□□□ -1.34
RFX1P22670 HIGD1AP16-201ENST00000450986 258 ntBASIC6.65□□□□□ -1.34
RFX1P22670 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC6.65□□□□□ -1.34
RFX1P22670 RPS27AP17-201ENST00000463344 455 ntBASIC6.65□□□□□ -1.34
RFX1P22670 COX6B1P2-201ENST00000489624 230 ntBASIC6.65□□□□□ -1.34
RFX1P22670 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC6.65□□□□□ -1.34
RFX1P22670 AC090958.1-201ENST00000511122 351 ntBASIC6.65□□□□□ -1.34
RFX1P22670 SNORD60.2-201ENST00000516883 86 ntBASIC6.65□□□□□ -1.34
RFX1P22670 RNA5SP337-201ENST00000517007 109 ntBASIC6.65□□□□□ -1.34
RFX1P22670 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC6.65□□□□□ -1.34
RFX1P22670 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC6.65□□□□□ -1.34
RFX1P22670 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.65□□□□□ -1.34
RFX1P22670 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RFX1P22670 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
RFX1P22670 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC6.65□□□□□ -1.34
RFX1P22670 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC6.65□□□□□ -1.34
RFX1P22670 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC6.65□□□□□ -1.34
RFX1P22670 MIR4795-201ENST00000584182 89 ntBASIC6.65□□□□□ -1.34
RFX1P22670 KC877982.1-201ENST00000602313 470 ntBASIC6.65□□□□□ -1.34
RFX1P22670 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.65□□□□□ -1.34
RFX1P22670 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.65□□□□□ -1.34
RFX1P22670 uc_338.12-201ENST00000616344 181 ntBASIC6.65□□□□□ -1.34
RFX1P22670 FRG1KP-201ENST00000623592 341 ntBASIC6.65□□□□□ -1.34
RFX1P22670 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
RFX1P22670 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.65□□□□□ -1.34
RFX1P22670 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
RFX1P22670 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
RFX1P22670 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.65□□□□□ -1.35
RFX1P22670 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms