Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 MIR4512-201ENST00000583257 77 ntBASIC3.92□□□□□ -1.78
XRCC1P18887 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.92□□□□□ -1.78
XRCC1P18887 AL451044.1-201ENST00000604867 238 ntBASIC3.92□□□□□ -1.78
XRCC1P18887 AL109618.2-201ENST00000605527 211 ntBASIC3.92□□□□□ -1.78
XRCC1P18887 AC006946.3-201ENST00000609791 756 ntBASIC3.92□□□□□ -1.78
XRCC1P18887 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
XRCC1P18887 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.92□□□□□ -1.78
XRCC1P18887 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
XRCC1P18887 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
XRCC1P18887 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
XRCC1P18887 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
XRCC1P18887 RNU6-609P-201ENST00000365459 107 ntBASIC3.91□□□□□ -1.78
XRCC1P18887 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
XRCC1P18887 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
XRCC1P18887 RNU6-98P-201ENST00000384173 107 ntBASIC3.91□□□□□ -1.78
XRCC1P18887 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
XRCC1P18887 HMGN2P8-201ENST00000391458 268 ntBASIC3.91□□□□□ -1.78
XRCC1P18887 USP9YP19-201ENST00000412165 485 ntBASIC3.91□□□□□ -1.78
XRCC1P18887 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
XRCC1P18887 AL390879.2-203ENST00000426943 1121 ntBASIC3.91□□□□□ -1.78
XRCC1P18887 AC096638.2-201ENST00000434965 711 ntBASIC3.91□□□□□ -1.78
XRCC1P18887 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
XRCC1P18887 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.91□□□□□ -1.78
XRCC1P18887 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.91□□□□□ -1.78
XRCC1P18887 FABP3P2-201ENST00000453169 399 ntBASIC3.91□□□□□ -1.78
XRCC1P18887 RN7SL93P-201ENST00000463035 293 ntBASIC3.91□□□□□ -1.78
XRCC1P18887 RPL21P71-201ENST00000465598 459 ntBASIC3.91□□□□□ -1.78
XRCC1P18887 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.91□□□□□ -1.78
XRCC1P18887 AC092045.1-201ENST00000495716 1231 ntBASIC3.91□□□□□ -1.78
XRCC1P18887 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.91□□□□□ -1.78
XRCC1P18887 AC008628.1-201ENST00000508663 265 ntBASIC3.91□□□□□ -1.78
XRCC1P18887 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.91□□□□□ -1.78
XRCC1P18887 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
XRCC1P18887 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
XRCC1P18887 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.91□□□□□ -1.78
XRCC1P18887 OR5AK3P-201ENST00000527486 1297 ntBASIC3.91□□□□□ -1.78
XRCC1P18887 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.91□□□□□ -1.78
XRCC1P18887 AC079148.1-201ENST00000565944 819 ntBASIC3.91□□□□□ -1.78
XRCC1P18887 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.91□□□□□ -1.78
XRCC1P18887 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.91□□□□□ -1.78
XRCC1P18887 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
XRCC1P18887 MIR6500-201ENST00000622700 86 ntBASIC3.91□□□□□ -1.78
XRCC1P18887 AC000123.2-201ENST00000623124 461 ntBASIC3.91□□□□□ -1.78
XRCC1P18887 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.91□□□□□ -1.78
XRCC1P18887 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.91□□□□□ -1.78
XRCC1P18887 AC097372.4-201ENST00000625025 466 ntBASIC3.91□□□□□ -1.78
XRCC1P18887 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.91□□□□□ -1.78
XRCC1P18887 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
XRCC1P18887 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
XRCC1P18887 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
XRCC1P18887 HSPA8P19-201ENST00000505359 1517 ntBASIC3.9□□□□□ -1.78
XRCC1P18887 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
XRCC1P18887 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
XRCC1P18887 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
XRCC1P18887 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.9□□□□□ -1.78
XRCC1P18887 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
XRCC1P18887 XIAPP3-201ENST00000312918 795 ntBASIC3.9□□□□□ -1.79
XRCC1P18887 RNU6-213P-201ENST00000384051 104 ntBASIC3.9□□□□□ -1.79
XRCC1P18887 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
XRCC1P18887 MIR1183-201ENST00000408856 89 ntBASIC3.9□□□□□ -1.79
XRCC1P18887 RNU2-72P-201ENST00000411175 163 ntBASIC3.9□□□□□ -1.79
XRCC1P18887 RPL36AP36-201ENST00000418616 301 ntBASIC3.9□□□□□ -1.79
XRCC1P18887 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.9□□□□□ -1.79
XRCC1P18887 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.9□□□□□ -1.79
XRCC1P18887 RNFT1P2-201ENST00000443064 757 ntBASIC3.9□□□□□ -1.79
XRCC1P18887 CDC27P1-201ENST00000445384 715 ntBASIC3.9□□□□□ -1.79
XRCC1P18887 AL359073.1-201ENST00000448036 403 ntBASIC3.9□□□□□ -1.79
XRCC1P18887 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.9□□□□□ -1.79
XRCC1P18887 RPS11P1-201ENST00000451072 473 ntBASIC3.9□□□□□ -1.79
XRCC1P18887 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.9□□□□□ -1.79
XRCC1P18887 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
XRCC1P18887 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.9□□□□□ -1.79
XRCC1P18887 AC020593.1-201ENST00000507399 299 ntBASIC3.9□□□□□ -1.79
XRCC1P18887 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.9□□□□□ -1.79
XRCC1P18887 NPM1P41-201ENST00000512920 831 ntBASIC3.9□□□□□ -1.79
XRCC1P18887 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.9□□□□□ -1.79
XRCC1P18887 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.9□□□□□ -1.79
XRCC1P18887 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.9□□□□□ -1.79
XRCC1P18887 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.9□□□□□ -1.79
XRCC1P18887 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.9□□□□□ -1.79
XRCC1P18887 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.9□□□□□ -1.79
XRCC1P18887 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.9□□□□□ -1.79
XRCC1P18887 AC106785.3-201ENST00000564064 847 ntBASIC3.9□□□□□ -1.79
XRCC1P18887 AC120057.2-201ENST00000571520 271 ntBASIC3.9□□□□□ -1.79
XRCC1P18887 RN7SL703P-201ENST00000578485 302 ntBASIC3.9□□□□□ -1.79
XRCC1P18887 AC115085.1-201ENST00000588924 229 ntBASIC3.9□□□□□ -1.79
XRCC1P18887 AC005255.1-201ENST00000593748 216 ntBASIC3.9□□□□□ -1.79
XRCC1P18887 AL592436.1-201ENST00000605135 558 ntBASIC3.9□□□□□ -1.79
XRCC1P18887 AL451086.1-201ENST00000605596 223 ntBASIC3.9□□□□□ -1.79
XRCC1P18887 OR2BH1P-201ENST00000608850 864 ntBASIC3.9□□□□□ -1.79
XRCC1P18887 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.9□□□□□ -1.79
XRCC1P18887 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
XRCC1P18887 AP003072.4-201ENST00000624580 310 ntBASIC3.9□□□□□ -1.79
XRCC1P18887 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.9□□□□□ -1.79
XRCC1P18887 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
XRCC1P18887 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
XRCC1P18887 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
XRCC1P18887 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
XRCC1P18887 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.79
XRCC1P18887 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms