Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
PDGFRAP16234 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
PDGFRAP16234 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDGFRAP16234 AC138393.1-206ENST00000540997 1886 ntBASIC4.35□□□□□ -1.71
PDGFRAP16234 AC025125.1-201ENST00000624743 1922 ntBASIC4.34□□□□□ -1.71
PDGFRAP16234 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.34□□□□□ -1.71
PDGFRAP16234 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.34□□□□□ -1.71
PDGFRAP16234 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDGFRAP16234 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
PDGFRAP16234 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
PDGFRAP16234 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDGFRAP16234 AC234772.1-201ENST00000377927 937 ntBASIC4.34□□□□□ -1.71
PDGFRAP16234 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.34□□□□□ -1.71
PDGFRAP16234 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PDGFRAP16234 SNORA37-201ENST00000384504 129 ntBASIC4.34□□□□□ -1.71
PDGFRAP16234 AL160275.2-201ENST00000412010 394 ntBASIC4.34□□□□□ -1.71
PDGFRAP16234 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.34□□□□□ -1.71
PDGFRAP16234 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.34□□□□□ -1.71
PDGFRAP16234 AL009174.1-201ENST00000426577 416 ntBASIC4.34□□□□□ -1.71
PDGFRAP16234 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.34□□□□□ -1.71
PDGFRAP16234 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PDGFRAP16234 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.34□□□□□ -1.71
PDGFRAP16234 AC233982.1-201ENST00000451247 436 ntBASIC4.34□□□□□ -1.71
PDGFRAP16234 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.34□□□□□ -1.71
PDGFRAP16234 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.34□□□□□ -1.71
PDGFRAP16234 RPS27P23-201ENST00000487608 251 ntBASIC4.34□□□□□ -1.71
PDGFRAP16234 RPS27AP13-201ENST00000498403 237 ntBASIC4.34□□□□□ -1.71
PDGFRAP16234 AC093801.2-201ENST00000503966 1050 ntBASIC4.34□□□□□ -1.71
PDGFRAP16234 AC020593.1-201ENST00000507399 299 ntBASIC4.34□□□□□ -1.71
PDGFRAP16234 MTCO1P35-201ENST00000515270 228 ntBASIC4.34□□□□□ -1.71
PDGFRAP16234 RNU6-416P-201ENST00000516265 103 ntBASIC4.34□□□□□ -1.71
PDGFRAP16234 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.34□□□□□ -1.71
PDGFRAP16234 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.34□□□□□ -1.71
PDGFRAP16234 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.34□□□□□ -1.71
PDGFRAP16234 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.34□□□□□ -1.71
PDGFRAP16234 SERPINE4P-201ENST00000554978 281 ntBASIC4.34□□□□□ -1.71
PDGFRAP16234 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.34□□□□□ -1.71
PDGFRAP16234 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.34□□□□□ -1.71
PDGFRAP16234 VN1R79P-201ENST00000593540 513 ntBASIC4.34□□□□□ -1.71
PDGFRAP16234 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.34□□□□□ -1.71
PDGFRAP16234 AC013468.1-201ENST00000608680 598 ntBASIC4.34□□□□□ -1.71
PDGFRAP16234 AL359535.1-201ENST00000612100 1087 ntBASIC4.34□□□□□ -1.71
PDGFRAP16234 AC007275.1-201ENST00000621243 671 ntBASIC4.34□□□□□ -1.71
PDGFRAP16234 C2orf27A-204ENST00000623058 969 ntBASIC4.34□□□□□ -1.71
PDGFRAP16234 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.34□□□□□ -1.71
PDGFRAP16234 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.34□□□□□ -1.71
PDGFRAP16234 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PDGFRAP16234 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.34□□□□□ -1.71
PDGFRAP16234 AC095050.2-201ENST00000510748 1458 ntBASIC4.34□□□□□ -1.71
PDGFRAP16234 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDGFRAP16234 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.34□□□□□ -1.71
PDGFRAP16234 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDGFRAP16234 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.34□□□□□ -1.72
PDGFRAP16234 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PDGFRAP16234 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
PDGFRAP16234 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
PDGFRAP16234 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PDGFRAP16234 KPNA2P2-201ENST00000419546 1489 ntBASIC4.33□□□□□ -1.72
PDGFRAP16234 DCAF13P3-201ENST00000561147 1334 ntBASIC4.33□□□□□ -1.72
PDGFRAP16234 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.33□□□□□ -1.72
PDGFRAP16234 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
PDGFRAP16234 RNU5B-4P-201ENST00000363508 111 ntBASIC4.33□□□□□ -1.72
PDGFRAP16234 RNU6-1257P-201ENST00000384625 110 ntBASIC4.33□□□□□ -1.72
PDGFRAP16234 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PDGFRAP16234 RNU6-272P-201ENST00000411028 104 ntBASIC4.33□□□□□ -1.72
PDGFRAP16234 RPS27AP12-201ENST00000429552 465 ntBASIC4.33□□□□□ -1.72
PDGFRAP16234 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.33□□□□□ -1.72
PDGFRAP16234 AC069285.2-201ENST00000440210 275 ntBASIC4.33□□□□□ -1.72
PDGFRAP16234 AC006011.1-201ENST00000442758 349 ntBASIC4.33□□□□□ -1.72
PDGFRAP16234 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.33□□□□□ -1.72
PDGFRAP16234 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.33□□□□□ -1.72
PDGFRAP16234 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.33□□□□□ -1.72
PDGFRAP16234 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
PDGFRAP16234 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.33□□□□□ -1.72
PDGFRAP16234 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.33□□□□□ -1.72
PDGFRAP16234 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.33□□□□□ -1.72
PDGFRAP16234 AC005351.1-201ENST00000511152 786 ntBASIC4.33□□□□□ -1.72
PDGFRAP16234 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PDGFRAP16234 AC104115.2-201ENST00000523026 687 ntBASIC4.33□□□□□ -1.72
PDGFRAP16234 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.33□□□□□ -1.72
PDGFRAP16234 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.33□□□□□ -1.72
PDGFRAP16234 AC006518.2-201ENST00000542513 940 ntBASIC4.33□□□□□ -1.72
PDGFRAP16234 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.33□□□□□ -1.72
PDGFRAP16234 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.33□□□□□ -1.72
PDGFRAP16234 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.33□□□□□ -1.72
PDGFRAP16234 AC023825.1-201ENST00000566704 1030 ntBASIC4.33□□□□□ -1.72
PDGFRAP16234 RPL23AP87-202ENST00000573039 466 ntBASIC4.33□□□□□ -1.72
PDGFRAP16234 AC008507.2-201ENST00000588402 1176 ntBASIC4.33□□□□□ -1.72
PDGFRAP16234 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.33□□□□□ -1.72
PDGFRAP16234 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.33□□□□□ -1.72
PDGFRAP16234 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.33□□□□□ -1.72
PDGFRAP16234 BNIP3P31-201ENST00000604515 566 ntBASIC4.33□□□□□ -1.72
PDGFRAP16234 AC010680.4-201ENST00000605334 543 ntBASIC4.33□□□□□ -1.72
PDGFRAP16234 AL591034.3-201ENST00000605511 685 ntBASIC4.33□□□□□ -1.72
PDGFRAP16234 AC092653.1-201ENST00000608509 531 ntBASIC4.33□□□□□ -1.72
PDGFRAP16234 AC090246.1-201ENST00000616499 426 ntBASIC4.33□□□□□ -1.72
PDGFRAP16234 AC068831.8-201ENST00000620171 435 ntBASIC4.33□□□□□ -1.72
PDGFRAP16234 AP005264.7-201ENST00000625003 745 ntBASIC4.33□□□□□ -1.72
PDGFRAP16234 AC068724.3-201ENST00000625906 87 ntBASIC4.33□□□□□ -1.72
PDGFRAP16234 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms