Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AP003400.3-201ENST00000624904 346 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC5.13□□□□□ -1.59
CNOT4O95628 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CNOT4O95628 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CNOT4O95628 DBF4P1-201ENST00000412976 1892 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CNOT4O95628 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.13□□□□□ -1.59
CNOT4O95628 BCORP1-203ENST00000513194 5093 ntBASIC5.13□□□□□ -1.59
CNOT4O95628 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CNOT4O95628 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.12□□□□□ -1.59
CNOT4O95628 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CNOT4O95628 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CNOT4O95628 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.12□□□□□ -1.59
CNOT4O95628 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
CNOT4O95628 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.12□□□□□ -1.59
CNOT4O95628 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CNOT4O95628 AL031595.2-201ENST00000624215 19071 ntBASIC5.12□□□□□ -1.59
CNOT4O95628 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CNOT4O95628 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CNOT4O95628 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CNOT4O95628 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CNOT4O95628 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CNOT4O95628 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.12□□□□□ -1.59
CNOT4O95628 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CNOT4O95628 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.12□□□□□ -1.59
CNOT4O95628 TMBIM7P-201ENST00000418074 855 ntBASIC5.12□□□□□ -1.59
CNOT4O95628 BOLA3P4-201ENST00000418151 400 ntBASIC5.12□□□□□ -1.59
CNOT4O95628 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC5.12□□□□□ -1.59
CNOT4O95628 AL355433.1-201ENST00000422804 300 ntBASIC5.12□□□□□ -1.59
CNOT4O95628 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CNOT4O95628 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CNOT4O95628 AC073335.1-201ENST00000427776 363 ntBASIC5.12□□□□□ -1.59
CNOT4O95628 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.12□□□□□ -1.59
CNOT4O95628 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.12□□□□□ -1.59
CNOT4O95628 SUMO2P3-201ENST00000438311 288 ntBASIC5.12□□□□□ -1.59
CNOT4O95628 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.12□□□□□ -1.59
CNOT4O95628 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.12□□□□□ -1.59
CNOT4O95628 MTND5P14-201ENST00000441481 1267 ntBASIC5.12□□□□□ -1.59
CNOT4O95628 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.12□□□□□ -1.59
CNOT4O95628 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC5.12□□□□□ -1.59
CNOT4O95628 SBDSP1-204ENST00000453858 737 ntBASIC5.12□□□□□ -1.59
CNOT4O95628 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.12□□□□□ -1.59
CNOT4O95628 AC091564.1-201ENST00000464563 479 ntBASIC5.12□□□□□ -1.59
CNOT4O95628 RBM43P1-201ENST00000476891 1081 ntBASIC5.12□□□□□ -1.59
CNOT4O95628 AC105914.1-201ENST00000511798 226 ntBASIC5.12□□□□□ -1.59
CNOT4O95628 SAP18P1-201ENST00000512058 390 ntBASIC5.12□□□□□ -1.59
CNOT4O95628 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.12□□□□□ -1.59
CNOT4O95628 CENPUP1-201ENST00000526649 1202 ntBASIC5.12□□□□□ -1.59
CNOT4O95628 AP005639.2-201ENST00000527592 928 ntBASIC5.12□□□□□ -1.59
CNOT4O95628 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC5.12□□□□□ -1.59
CNOT4O95628 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.12□□□□□ -1.59
CNOT4O95628 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.12□□□□□ -1.59
CNOT4O95628 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.12□□□□□ -1.59
CNOT4O95628 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.12□□□□□ -1.59
CNOT4O95628 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CNOT4O95628 AC005261.5-201ENST00000596280 355 ntBASIC5.12□□□□□ -1.59
CNOT4O95628 PRELID3BP8-201ENST00000604148 295 ntBASIC5.12□□□□□ -1.59
CNOT4O95628 SUMO2P15-201ENST00000604285 278 ntBASIC5.12□□□□□ -1.59
CNOT4O95628 AL139286.1-201ENST00000604465 483 ntBASIC5.12□□□□□ -1.59
CNOT4O95628 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CNOT4O95628 AL691477.1-201ENST00000624398 162 ntBASIC5.12□□□□□ -1.59
CNOT4O95628 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.12□□□□□ -1.59
CNOT4O95628 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
CNOT4O95628 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.12□□□□□ -1.59
CNOT4O95628 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.12□□□□□ -1.59
CNOT4O95628 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.12□□□□□ -1.59
CNOT4O95628 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CNOT4O95628 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CNOT4O95628 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CNOT4O95628 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
CNOT4O95628 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CNOT4O95628 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CNOT4O95628 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.12□□□□□ -1.59
CNOT4O95628 XPOTP1-201ENST00000443317 2398 ntBASIC5.12□□□□□ -1.59
CNOT4O95628 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CNOT4O95628 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.12□□□□□ -1.59
CNOT4O95628 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNOT4O95628 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNOT4O95628 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CNOT4O95628 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.11□□□□□ -1.59
CNOT4O95628 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.11□□□□□ -1.59
CNOT4O95628 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CNOT4O95628 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CNOT4O95628 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.11□□□□□ -1.59
CNOT4O95628 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.11□□□□□ -1.59
CNOT4O95628 OR9K1P-201ENST00000326513 941 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 MIR133A2-201ENST00000347538 102 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.11□□□□□ -1.59
CNOT4O95628 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.11□□□□□ -1.59
CNOT4O95628 RNU6-1122P-201ENST00000384449 107 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 SNORD116-23-201ENST00000384645 92 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 U8.14-201ENST00000390843 143 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 RPL11P3-201ENST00000395256 523 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 RPS3AP36-201ENST00000398190 775 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 MIR937-201ENST00000401271 86 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 RNU4-55P-201ENST00000410731 137 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 RPS3AP3-201ENST00000411933 242 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 AP000534.2-201ENST00000412729 568 ntBASIC5.11□□□□□ -1.59
CNOT4O95628 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.11□□□□□ -1.59
CNOT4O95628 OR2AT2P-201ENST00000413438 905 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms