Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.54□□□□□ -1.84
CTNSO60931 HMGN2P8-201ENST00000391458 268 ntBASIC3.54□□□□□ -1.84
CTNSO60931 TPTE2P1-204ENST00000435256 593 ntBASIC3.54□□□□□ -1.84
CTNSO60931 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CTNSO60931 HMGB1P26-201ENST00000452520 628 ntBASIC3.54□□□□□ -1.84
CTNSO60931 TVP23BP2-201ENST00000455082 615 ntBASIC3.54□□□□□ -1.84
CTNSO60931 DNAJC19P1-201ENST00000455312 319 ntBASIC3.54□□□□□ -1.84
CTNSO60931 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.54□□□□□ -1.84
CTNSO60931 RPL7P48-201ENST00000461513 746 ntBASIC3.54□□□□□ -1.84
CTNSO60931 AL133162.1-201ENST00000463228 453 ntBASIC3.54□□□□□ -1.84
CTNSO60931 AC006511.1-201ENST00000470614 315 ntBASIC3.54□□□□□ -1.84
CTNSO60931 AC007688.1-201ENST00000475592 759 ntBASIC3.54□□□□□ -1.84
CTNSO60931 TRBV12-2-201ENST00000489763 344 ntBASIC3.54□□□□□ -1.84
CTNSO60931 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.54□□□□□ -1.84
CTNSO60931 OR52A4P-203ENST00000498233 1014 ntBASIC3.54□□□□□ -1.84
CTNSO60931 SNX5P1-201ENST00000505757 1041 ntBASIC3.54□□□□□ -1.84
CTNSO60931 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.54□□□□□ -1.84
CTNSO60931 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CTNSO60931 AC026402.1-201ENST00000513642 170 ntBASIC3.54□□□□□ -1.84
CTNSO60931 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CTNSO60931 RNU6-1004P-201ENST00000516584 111 ntBASIC3.54□□□□□ -1.84
CTNSO60931 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.54□□□□□ -1.84
CTNSO60931 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.54□□□□□ -1.84
CTNSO60931 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.54□□□□□ -1.84
CTNSO60931 AC006960.3-201ENST00000561845 705 ntBASIC3.54□□□□□ -1.84
CTNSO60931 AC087499.8-201ENST00000578406 226 ntBASIC3.54□□□□□ -1.84
CTNSO60931 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.54□□□□□ -1.84
CTNSO60931 MIMT1-201ENST00000597105 1050 ntBASIC3.54□□□□□ -1.84
CTNSO60931 EIF1P6-201ENST00000600054 334 ntBASIC3.54□□□□□ -1.84
CTNSO60931 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.54□□□□□ -1.84
CTNSO60931 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CTNSO60931 AC079684.1-201ENST00000621405 437 ntBASIC3.54□□□□□ -1.84
CTNSO60931 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.54□□□□□ -1.84
CTNSO60931 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CTNSO60931 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CTNSO60931 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CTNSO60931 AC025125.1-201ENST00000624743 1922 ntBASIC3.54□□□□□ -1.84
CTNSO60931 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.54□□□□□ -1.84
CTNSO60931 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CTNSO60931 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CTNSO60931 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CTNSO60931 LINC00561-201ENST00000565815 2738 ntBASIC3.53□□□□□ -1.84
CTNSO60931 RNA5SP167-201ENST00000365461 116 ntBASIC3.53□□□□□ -1.84
CTNSO60931 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CTNSO60931 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CTNSO60931 RNA5SP424-201ENST00000390988 115 ntBASIC3.53□□□□□ -1.84
CTNSO60931 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.53□□□□□ -1.84
CTNSO60931 RN7SKP202-201ENST00000410439 330 ntBASIC3.53□□□□□ -1.84
CTNSO60931 RHEBP3-201ENST00000411920 351 ntBASIC3.53□□□□□ -1.84
CTNSO60931 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
CTNSO60931 RPL17P36-201ENST00000420302 549 ntBASIC3.53□□□□□ -1.84
CTNSO60931 AL139247.1-201ENST00000422768 325 ntBASIC3.53□□□□□ -1.84
CTNSO60931 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.53□□□□□ -1.84
CTNSO60931 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.53□□□□□ -1.84
CTNSO60931 AC245517.2-201ENST00000442890 346 ntBASIC3.53□□□□□ -1.84
CTNSO60931 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.53□□□□□ -1.84
CTNSO60931 CFTRP1-201ENST00000456646 183 ntBASIC3.53□□□□□ -1.84
CTNSO60931 UBDP1-202ENST00000457888 382 ntBASIC3.53□□□□□ -1.84
CTNSO60931 RN7SL93P-201ENST00000463035 293 ntBASIC3.53□□□□□ -1.84
CTNSO60931 AL049830.2-201ENST00000480072 201 ntBASIC3.53□□□□□ -1.84
CTNSO60931 AC004069.2-201ENST00000505438 1114 ntBASIC3.53□□□□□ -1.84
CTNSO60931 AC005798.1-201ENST00000513715 387 ntBASIC3.53□□□□□ -1.84
CTNSO60931 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.53□□□□□ -1.84
CTNSO60931 AC022790.1-201ENST00000522872 204 ntBASIC3.53□□□□□ -1.84
CTNSO60931 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.53□□□□□ -1.84
CTNSO60931 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.53□□□□□ -1.84
CTNSO60931 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.53□□□□□ -1.84
CTNSO60931 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.53□□□□□ -1.84
CTNSO60931 AP001542.1-201ENST00000591314 200 ntBASIC3.53□□□□□ -1.84
CTNSO60931 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.53□□□□□ -1.84
CTNSO60931 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.53□□□□□ -1.84
CTNSO60931 AC090525.3-201ENST00000605601 189 ntBASIC3.53□□□□□ -1.84
CTNSO60931 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.53□□□□□ -1.84
CTNSO60931 AC055764.2-201ENST00000610089 670 ntBASIC3.53□□□□□ -1.84
CTNSO60931 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CTNSO60931 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
CTNSO60931 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CTNSO60931 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CTNSO60931 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
CTNSO60931 AC007342.9-201ENST00000623877 1385 ntBASIC3.52□□□□□ -1.85
CTNSO60931 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
CTNSO60931 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CTNSO60931 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CTNSO60931 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CTNSO60931 OTUD4P1-201ENST00000237841 3067 ntBASIC3.52□□□□□ -1.85
CTNSO60931 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.52□□□□□ -1.85
CTNSO60931 RNU1-18P-201ENST00000363062 164 ntBASIC3.52□□□□□ -1.85
CTNSO60931 Y_RNA.126-201ENST00000363382 111 ntBASIC3.52□□□□□ -1.85
CTNSO60931 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CTNSO60931 PTMAP5-201ENST00000393073 333 ntBASIC3.52□□□□□ -1.85
CTNSO60931 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.52□□□□□ -1.85
CTNSO60931 AL590704.1-201ENST00000402856 794 ntBASIC3.52□□□□□ -1.85
CTNSO60931 AL512504.1-201ENST00000415494 778 ntBASIC3.52□□□□□ -1.85
CTNSO60931 RPL36AP36-201ENST00000418616 301 ntBASIC3.52□□□□□ -1.85
CTNSO60931 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CTNSO60931 TCEA1P2-201ENST00000420496 906 ntBASIC3.52□□□□□ -1.85
CTNSO60931 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.52□□□□□ -1.85
CTNSO60931 RPS26P40-201ENST00000435209 294 ntBASIC3.52□□□□□ -1.85
CTNSO60931 AL031663.1-201ENST00000437445 219 ntBASIC3.52□□□□□ -1.85
CTNSO60931 AC092809.1-201ENST00000441469 474 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms