Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TO15178 AC108022.1-201ENST00000493466 478 ntBASIC4.17□□□□□ -1.74
TO15178 RPS4XP18-201ENST00000495480 763 ntBASIC4.17□□□□□ -1.74
TO15178 AC118282.1-201ENST00000506408 765 ntBASIC4.17□□□□□ -1.74
TO15178 AC109471.1-201ENST00000511631 612 ntBASIC4.17□□□□□ -1.74
TO15178 RN7SKP92-201ENST00000517266 244 ntBASIC4.17□□□□□ -1.74
TO15178 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.17□□□□□ -1.74
TO15178 SOD1P3-201ENST00000518682 454 ntBASIC4.17□□□□□ -1.74
TO15178 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.17□□□□□ -1.74
TO15178 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.17□□□□□ -1.74
TO15178 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
TO15178 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.17□□□□□ -1.74
TO15178 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.17□□□□□ -1.74
TO15178 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.17□□□□□ -1.74
TO15178 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.17□□□□□ -1.74
TO15178 GSTP1P1-201ENST00000548078 319 ntBASIC4.17□□□□□ -1.74
TO15178 AC007424.1-203ENST00000554613 687 ntBASIC4.17□□□□□ -1.74
TO15178 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.17□□□□□ -1.74
TO15178 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.17□□□□□ -1.74
TO15178 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.17□□□□□ -1.74
TO15178 AC015688.2-201ENST00000584523 262 ntBASIC4.17□□□□□ -1.74
TO15178 AC008687.2-201ENST00000597865 520 ntBASIC4.17□□□□□ -1.74
TO15178 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.17□□□□□ -1.74
TO15178 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.17□□□□□ -1.74
TO15178 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.17□□□□□ -1.74
TO15178 AC006386.1-201ENST00000619436 415 ntBASIC4.17□□□□□ -1.74
TO15178 RMST_9.1-201ENST00000619945 193 ntBASIC4.17□□□□□ -1.74
TO15178 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.17□□□□□ -1.74
TO15178 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TO15178 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TO15178 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TO15178 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TO15178 AC015813.6-201ENST00000624409 5808 ntBASIC4.16□□□□□ -1.74
TO15178 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.16□□□□□ -1.74
TO15178 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.16□□□□□ -1.74
TO15178 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.16□□□□□ -1.74
TO15178 ZNF33CP-201ENST00000432492 2030 ntBASIC4.16□□□□□ -1.74
TO15178 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TO15178 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TO15178 XIAPP3-201ENST00000312918 795 ntBASIC4.16□□□□□ -1.74
TO15178 RNA5SP391-201ENST00000363456 119 ntBASIC4.16□□□□□ -1.74
TO15178 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.16□□□□□ -1.74
TO15178 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TO15178 RNU6-413P-201ENST00000384115 107 ntBASIC4.16□□□□□ -1.74
TO15178 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.16□□□□□ -1.74
TO15178 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.16□□□□□ -1.74
TO15178 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.16□□□□□ -1.74
TO15178 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.16□□□□□ -1.74
TO15178 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.16□□□□□ -1.74
TO15178 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.16□□□□□ -1.74
TO15178 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.16□□□□□ -1.74
TO15178 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.16□□□□□ -1.74
TO15178 HMGB3P5-201ENST00000428894 612 ntBASIC4.16□□□□□ -1.74
TO15178 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.16□□□□□ -1.74
TO15178 MOB1AP1-201ENST00000430903 535 ntBASIC4.16□□□□□ -1.74
TO15178 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.16□□□□□ -1.74
TO15178 AC007327.1-201ENST00000447461 264 ntBASIC4.16□□□□□ -1.74
TO15178 AC079776.3-201ENST00000450665 370 ntBASIC4.16□□□□□ -1.74
TO15178 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.16□□□□□ -1.74
TO15178 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.16□□□□□ -1.74
TO15178 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.16□□□□□ -1.74
TO15178 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.16□□□□□ -1.74
TO15178 AC008897.1-201ENST00000494006 347 ntBASIC4.16□□□□□ -1.74
TO15178 AC084024.2-201ENST00000503480 791 ntBASIC4.16□□□□□ -1.74
TO15178 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.16□□□□□ -1.74
TO15178 AC011352.3-201ENST00000505162 593 ntBASIC4.16□□□□□ -1.74
TO15178 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.16□□□□□ -1.74
TO15178 AC111000.3-201ENST00000508057 576 ntBASIC4.16□□□□□ -1.74
TO15178 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.16□□□□□ -1.74
TO15178 FTH1P9-201ENST00000513251 355 ntBASIC4.16□□□□□ -1.74
TO15178 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.16□□□□□ -1.74
TO15178 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.16□□□□□ -1.74
TO15178 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.16□□□□□ -1.74
TO15178 CYCSP28-201ENST00000534284 321 ntBASIC4.16□□□□□ -1.74
TO15178 RPL21P7-201ENST00000557463 483 ntBASIC4.16□□□□□ -1.74
TO15178 AL158211.1-201ENST00000566763 763 ntBASIC4.16□□□□□ -1.74
TO15178 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.16□□□□□ -1.74
TO15178 AC022069.1-201ENST00000582910 658 ntBASIC4.16□□□□□ -1.74
TO15178 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.16□□□□□ -1.74
TO15178 AC234772.3-201ENST00000602277 528 ntBASIC4.16□□□□□ -1.74
TO15178 AC105429.2-201ENST00000610567 517 ntBASIC4.16□□□□□ -1.74
TO15178 AP005019.3-201ENST00000620418 560 ntBASIC4.16□□□□□ -1.74
TO15178 AC091905.2-201ENST00000623143 306 ntBASIC4.16□□□□□ -1.74
TO15178 EOGT-210ENST00000615922 1931 ntBASIC4.16□□□□□ -1.74
TO15178 AP005901.5-201ENST00000545779 1796 ntBASIC4.16□□□□□ -1.74
TO15178 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.16□□□□□ -1.74
TO15178 AC011266.1-201ENST00000624119 3569 ntBASIC4.16□□□□□ -1.74
TO15178 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TO15178 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.16□□□□□ -1.74
TO15178 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TO15178 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TO15178 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TO15178 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
TO15178 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
TO15178 AC139769.1-204ENST00000472297 1931 ntBASIC4.15□□□□□ -1.74
TO15178 AC017104.4-201ENST00000636283 1592 ntBASIC4.15□□□□□ -1.74
TO15178 EIF2AP4-201ENST00000424793 1781 ntBASIC4.15□□□□□ -1.74
TO15178 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
TO15178 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
TO15178 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms