Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
FOXN3O00409 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
FOXN3O00409 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
FOXN3O00409 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.02□□□□□ -1.61
FOXN3O00409 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
FOXN3O00409 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.02□□□□□ -1.61
FOXN3O00409 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
FOXN3O00409 OR10J6P-201ENST00000289731 930 ntBASIC5.02□□□□□ -1.61
FOXN3O00409 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
FOXN3O00409 RN7SKP149-201ENST00000363008 344 ntBASIC5.02□□□□□ -1.61
FOXN3O00409 SNORD116-8-201ENST00000384365 95 ntBASIC5.02□□□□□ -1.61
FOXN3O00409 RNU6-441P-201ENST00000384545 106 ntBASIC5.02□□□□□ -1.61
FOXN3O00409 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
FOXN3O00409 RNA5SP113-201ENST00000410486 84 ntBASIC5.02□□□□□ -1.61
FOXN3O00409 RNU4-72P-201ENST00000410754 173 ntBASIC5.02□□□□□ -1.61
FOXN3O00409 AL591848.1-201ENST00000413092 322 ntBASIC5.02□□□□□ -1.61
FOXN3O00409 AC009518.2-201ENST00000418056 731 ntBASIC5.02□□□□□ -1.61
FOXN3O00409 AL138785.1-201ENST00000425821 331 ntBASIC5.02□□□□□ -1.61
FOXN3O00409 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.02□□□□□ -1.61
FOXN3O00409 CEACAMP1-201ENST00000434624 1035 ntBASIC5.02□□□□□ -1.61
FOXN3O00409 YWHAZP7-201ENST00000436906 631 ntBASIC5.02□□□□□ -1.61
FOXN3O00409 CEACAMP9-201ENST00000442990 513 ntBASIC5.02□□□□□ -1.61
FOXN3O00409 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.02□□□□□ -1.61
FOXN3O00409 OR1H1P-201ENST00000448731 937 ntBASIC5.02□□□□□ -1.61
FOXN3O00409 AC108463.1-201ENST00000450258 347 ntBASIC5.02□□□□□ -1.61
FOXN3O00409 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.02□□□□□ -1.61
FOXN3O00409 NCOR1P1-202ENST00000486162 291 ntBASIC5.02□□□□□ -1.61
FOXN3O00409 ACTG1P13-201ENST00000486987 1043 ntBASIC5.02□□□□□ -1.61
FOXN3O00409 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
FOXN3O00409 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
FOXN3O00409 HMGB1P28-201ENST00000507778 552 ntBASIC5.02□□□□□ -1.61
FOXN3O00409 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
FOXN3O00409 AC010486.3-201ENST00000511602 785 ntBASIC5.02□□□□□ -1.61
FOXN3O00409 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.02□□□□□ -1.61
FOXN3O00409 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.02□□□□□ -1.61
FOXN3O00409 RN7SKP276-201ENST00000516242 268 ntBASIC5.02□□□□□ -1.61
FOXN3O00409 AC105185.1-201ENST00000518705 535 ntBASIC5.02□□□□□ -1.61
FOXN3O00409 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.02□□□□□ -1.61
FOXN3O00409 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.02□□□□□ -1.61
FOXN3O00409 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.02□□□□□ -1.61
FOXN3O00409 MTCO1P47-201ENST00000523889 1271 ntBASIC5.02□□□□□ -1.61
FOXN3O00409 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.02□□□□□ -1.61
FOXN3O00409 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.02□□□□□ -1.61
FOXN3O00409 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.02□□□□□ -1.61
FOXN3O00409 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.02□□□□□ -1.61
FOXN3O00409 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.02□□□□□ -1.61
FOXN3O00409 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.02□□□□□ -1.61
FOXN3O00409 AC051619.2-201ENST00000559063 397 ntBASIC5.02□□□□□ -1.61
FOXN3O00409 RN7SL652P-201ENST00000577769 300 ntBASIC5.02□□□□□ -1.61
FOXN3O00409 MIR4443-201ENST00000585052 53 ntBASIC5.02□□□□□ -1.61
FOXN3O00409 AL031320.1-201ENST00000604177 357 ntBASIC5.02□□□□□ -1.61
FOXN3O00409 AC091946.2-201ENST00000606105 291 ntBASIC5.02□□□□□ -1.61
FOXN3O00409 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
FOXN3O00409 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC5.02□□□□□ -1.61
FOXN3O00409 MIR6715B-201ENST00000637172 77 ntBASIC5.02□□□□□ -1.61
FOXN3O00409 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
FOXN3O00409 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
FOXN3O00409 LINC01355-201ENST00000566551 5444 ntBASIC5.02□□□□□ -1.61
FOXN3O00409 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
FOXN3O00409 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.02□□□□□ -1.61
FOXN3O00409 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.01□□□□□ -1.61
FOXN3O00409 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
FOXN3O00409 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
FOXN3O00409 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.01□□□□□ -1.61
FOXN3O00409 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
FOXN3O00409 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.01□□□□□ -1.61
FOXN3O00409 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
FOXN3O00409 OR4A15-201ENST00000314706 1035 ntBASIC5.01□□□□□ -1.61
FOXN3O00409 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
FOXN3O00409 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
FOXN3O00409 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
FOXN3O00409 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.01□□□□□ -1.61
FOXN3O00409 RNU6-1200P-201ENST00000384162 107 ntBASIC5.01□□□□□ -1.61
FOXN3O00409 RNU6-921P-201ENST00000384361 107 ntBASIC5.01□□□□□ -1.61
FOXN3O00409 RNU6-253P-201ENST00000384730 105 ntBASIC5.01□□□□□ -1.61
FOXN3O00409 SNORD96B-201ENST00000386148 79 ntBASIC5.01□□□□□ -1.61
FOXN3O00409 VDAC1P6-201ENST00000430062 855 ntBASIC5.01□□□□□ -1.61
FOXN3O00409 B3GNT2P1-201ENST00000434960 952 ntBASIC5.01□□□□□ -1.61
FOXN3O00409 Z80107.2-201ENST00000445127 392 ntBASIC5.01□□□□□ -1.61
FOXN3O00409 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.01□□□□□ -1.61
FOXN3O00409 HMGB3P21-201ENST00000452483 547 ntBASIC5.01□□□□□ -1.61
FOXN3O00409 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.01□□□□□ -1.61
FOXN3O00409 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.01□□□□□ -1.61
FOXN3O00409 AC090142.1-201ENST00000465776 462 ntBASIC5.01□□□□□ -1.61
FOXN3O00409 AC087879.1-201ENST00000474343 374 ntBASIC5.01□□□□□ -1.61
FOXN3O00409 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.01□□□□□ -1.61
FOXN3O00409 RPF2P2-201ENST00000504693 896 ntBASIC5.01□□□□□ -1.61
FOXN3O00409 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.01□□□□□ -1.61
FOXN3O00409 AC018797.3-201ENST00000513388 1241 ntBASIC5.01□□□□□ -1.61
FOXN3O00409 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.01□□□□□ -1.61
FOXN3O00409 AC087373.1-201ENST00000524920 491 ntBASIC5.01□□□□□ -1.61
FOXN3O00409 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.01□□□□□ -1.61
FOXN3O00409 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.01□□□□□ -1.61
FOXN3O00409 UBE2NP1-201ENST00000545592 458 ntBASIC5.01□□□□□ -1.61
FOXN3O00409 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.01□□□□□ -1.61
FOXN3O00409 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.01□□□□□ -1.61
FOXN3O00409 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.01□□□□□ -1.61
FOXN3O00409 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC5.01□□□□□ -1.61
FOXN3O00409 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.01□□□□□ -1.61
FOXN3O00409 AC105129.1-201ENST00000560250 297 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms