Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ANKRD36P1-201ENST00000344424 659 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 RNU1-94P-201ENST00000362627 173 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 RNA5SP307-201ENST00000362863 116 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 Y_RNA.126-201ENST00000363382 111 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 RNU5E-10P-201ENST00000363506 118 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 DSTNP4-201ENST00000399472 474 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 AL078604.1-201ENST00000404609 466 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 SNORA11F-201ENST00000408237 128 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 SNORA11-201ENST00000408789 128 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 AC009237.10-201ENST00000414112 510 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 RPS7P9-201ENST00000414704 586 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 AL449283.1-202ENST00000418249 604 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 AC027644.1-201ENST00000419595 298 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 C1DP1-201ENST00000426049 402 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 AL513175.1-201ENST00000431492 780 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 AC010881.1-201ENST00000433830 235 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 RPL23AP52-201ENST00000439311 478 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 RPS27AP15-201ENST00000447672 466 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 RPL7P59-201ENST00000447700 943 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 RPS15AP1-201ENST00000457423 391 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 snoU13.7-201ENST00000459220 104 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 AC041039.1-201ENST00000485656 536 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 HMGB1P21-201ENST00000502313 581 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 RNU6-488P-201ENST00000515918 99 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 RN7SKP82-201ENST00000516786 223 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 SOD1P3-201ENST00000518682 454 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 AP003730.1-201ENST00000524605 285 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 MTCO3P15-201ENST00000526563 574 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 AC091057.3-201ENST00000602684 733 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 AC079587.1-201ENST00000603846 277 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 AC067959.1-201ENST00000604334 379 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 Z98200.1-201ENST00000607298 470 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 AC022960.3-201ENST00000619794 441 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 AL356121.2-201ENST00000624715 780 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 AC140479.6-201ENST00000633535 357 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 AC107081.3-201ENST00000612715 2034 ntBASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
NPIPA3F8WFD2 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 RNU1-20P-201ENST00000363314 162 ntBASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 RNA5SP28-201ENST00000363841 119 ntBASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 RNA5SP515-201ENST00000364570 118 ntBASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 RNA5SP151-201ENST00000365632 117 ntBASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 RNU6-224P-201ENST00000384055 107 ntBASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 NRBF2P2-201ENST00000413087 861 ntBASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 AL139095.3-201ENST00000419672 1203 ntBASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 MTCYBP32-201ENST00000427945 1084 ntBASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 NPM1P34-201ENST00000428821 893 ntBASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 RPL36P19-201ENST00000430744 301 ntBASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 UBE2V1P3-201ENST00000439651 417 ntBASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 AC104164.3-201ENST00000467363 1258 ntBASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.94□□□□□ -1.78
NPIPA3F8WFD2 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms