Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 RNA5SP446-201ENST00000515955 82 ntBASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 AC040904.1-201ENST00000590850 223 ntBASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 ARF4P1-201ENST00000605447 541 ntBASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 AC080013.6-201ENST00000606185 215 ntBASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 AC105227.2-201ENST00000615075 605 ntBASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 AL157770.1-201ENST00000623049 439 ntBASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 AL512506.2-201ENST00000624472 458 ntBASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 AC112200.1-201ENST00000625015 234 ntBASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 OR2L1P-202ENST00000641567 1023 ntBASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 AC093311.1-201ENST00000506586 2021 ntBASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 DDX18P4-201ENST00000511690 1966 ntBASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 AC006042.3-201ENST00000454684 1469 ntBASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
RAI2Q9Y5P3 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 AC139769.1-204ENST00000472297 1931 ntBASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 AL121657.1-201ENST00000327215 531 ntBASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 snoZ40.1-201ENST00000364540 72 ntBASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 MIR554-201ENST00000384874 96 ntBASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 RN7SKP202-201ENST00000410439 330 ntBASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 RAP1BP1-201ENST00000412709 553 ntBASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 RPL7AP25-201ENST00000423357 805 ntBASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 MTCO1P3-201ENST00000429327 192 ntBASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 COX7BP2-201ENST00000437976 242 ntBASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 RPL23AP43-201ENST00000446445 471 ntBASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 AC012671.1-201ENST00000451912 203 ntBASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 AC073522.1-201ENST00000483312 377 ntBASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 RPF2P2-201ENST00000504693 896 ntBASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 AC122134.1-201ENST00000565664 1104 ntBASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 AC109446.2-201ENST00000567872 497 ntBASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 VN1R88P-201ENST00000596787 292 ntBASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 BPIFA4P-203ENST00000603168 689 ntBASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 AL158042.1-201ENST00000605338 460 ntBASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 AC090948.2-201ENST00000607363 564 ntBASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 AL360219.1-201ENST00000610230 366 ntBASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 AC009318.3-201ENST00000616916 503 ntBASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 AP005019.3-201ENST00000620418 560 ntBASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 AC022509.4-201ENST00000621404 572 ntBASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 AC068137.4-201ENST00000638485 296 ntBASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 MFSD8-245ENST00000641743 948 ntBASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 OR56B2P-202ENST00000641377 2453 ntBASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 AC010300.1-201ENST00000600671 5134 ntBASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 RAD17P1-201ENST00000418130 2042 ntBASIC4.55□□□□□ -1.68
RAI2Q9Y5P3 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.54□□□□□ -1.68
RAI2Q9Y5P3 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RAI2Q9Y5P3 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms