Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSX2IPQ9Y2D8 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.12□□□□□ -1.59
SSX2IPQ9Y2D8 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.12□□□□□ -1.59
SSX2IPQ9Y2D8 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.12□□□□□ -1.59
SSX2IPQ9Y2D8 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SSX2IPQ9Y2D8 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SSX2IPQ9Y2D8 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.12□□□□□ -1.59
SSX2IPQ9Y2D8 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 OR56B2P-202ENST00000641377 2453 ntBASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 RNU4-24P-201ENST00000364565 139 ntBASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 OR52E6-202ENST00000379946 954 ntBASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 RNU6-178P-201ENST00000384631 104 ntBASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 MIR129-1-201ENST00000384972 72 ntBASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 MIR1303-201ENST00000408625 86 ntBASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 NRBF2P2-201ENST00000413087 861 ntBASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 DPRXP1-201ENST00000426312 460 ntBASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 RPS17P8-201ENST00000434525 335 ntBASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AC022431.1-201ENST00000450941 438 ntBASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AC105185.1-201ENST00000518705 535 ntBASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AP003033.1-201ENST00000527244 415 ntBASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 HIGD1AP17-201ENST00000554576 276 ntBASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AC005191.1-201ENST00000603950 358 ntBASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AC009220.3-201ENST00000604318 586 ntBASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AL356218.2-201ENST00000605264 187 ntBASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AC090425.2-201ENST00000608818 501 ntBASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AC083809.1-201ENST00000615051 472 ntBASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AC016717.3-201ENST00000624730 554 ntBASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 MTND4P31-201ENST00000425607 1343 ntBASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AC005539.1-201ENST00000443768 1479 ntBASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AL390862.1-201ENST00000635467 1469 ntBASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SSX2IPQ9Y2D8 AL592148.3-201ENST00000608771 2646 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 HMGB1P5-201ENST00000255320 642 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 RNU6-553P-201ENST00000364047 96 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 SNORD116-4-201ENST00000384733 96 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 U3.32-201ENST00000408116 212 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 EIF4A1P3-201ENST00000411521 244 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 MRPS36P1-201ENST00000421291 307 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 AC019178.2-201ENST00000423595 505 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 FABP7P1-201ENST00000424004 391 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 AL009174.1-201ENST00000426577 416 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 RPL21P110-201ENST00000433345 446 ntBASIC5.1□□□□□ -1.59
SSX2IPQ9Y2D8 AL451139.1-201ENST00000434718 346 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms