Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SIX4Q9UIU6 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 AC073055.1-201ENST00000456901 1621 ntBASIC4.47□□□□□ -1.69
SIX4Q9UIU6 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 ENSAP3-201ENST00000312710 333 ntBASIC4.47□□□□□ -1.69
SIX4Q9UIU6 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 RNU4-40P-201ENST00000364351 143 ntBASIC4.47□□□□□ -1.69
SIX4Q9UIU6 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 ATP5F1P2-201ENST00000398143 760 ntBASIC4.47□□□□□ -1.69
SIX4Q9UIU6 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 EIF4A1P3-201ENST00000411521 244 ntBASIC4.47□□□□□ -1.69
SIX4Q9UIU6 TCEA1P4-201ENST00000415066 844 ntBASIC4.47□□□□□ -1.69
SIX4Q9UIU6 LINC01881-201ENST00000416103 412 ntBASIC4.47□□□□□ -1.69
SIX4Q9UIU6 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 AL356095.1-201ENST00000417217 199 ntBASIC4.47□□□□□ -1.69
SIX4Q9UIU6 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 AL590609.2-201ENST00000421430 368 ntBASIC4.47□□□□□ -1.69
SIX4Q9UIU6 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 GTF2IP2-201ENST00000424290 697 ntBASIC4.47□□□□□ -1.69
SIX4Q9UIU6 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 AC006011.1-201ENST00000442758 349 ntBASIC4.47□□□□□ -1.69
SIX4Q9UIU6 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 AC004263.1-201ENST00000479327 332 ntBASIC4.47□□□□□ -1.69
SIX4Q9UIU6 AC011037.1-201ENST00000483964 558 ntBASIC4.47□□□□□ -1.69
SIX4Q9UIU6 AC091951.3-201ENST00000504093 246 ntBASIC4.47□□□□□ -1.69
SIX4Q9UIU6 IGBP1P5-201ENST00000507524 1000 ntBASIC4.47□□□□□ -1.69
SIX4Q9UIU6 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 HMGB1P1-201ENST00000522557 636 ntBASIC4.47□□□□□ -1.69
SIX4Q9UIU6 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 OR4A2P-201ENST00000527276 913 ntBASIC4.47□□□□□ -1.69
SIX4Q9UIU6 DEFB130C-202ENST00000530001 230 ntBASIC4.47□□□□□ -1.69
SIX4Q9UIU6 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 CYP2C60P-201ENST00000566088 139 ntBASIC4.47□□□□□ -1.69
SIX4Q9UIU6 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 MIR548Y-201ENST00000582739 110 ntBASIC4.47□□□□□ -1.69
SIX4Q9UIU6 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 AC061975.8-201ENST00000587058 721 ntBASIC4.47□□□□□ -1.69
SIX4Q9UIU6 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 AC091057.2-201ENST00000602594 792 ntBASIC4.47□□□□□ -1.69
SIX4Q9UIU6 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 AL138478.1-201ENST00000612252 832 ntBASIC4.47□□□□□ -1.69
SIX4Q9UIU6 AC093783.1-201ENST00000612976 329 ntBASIC4.47□□□□□ -1.69
SIX4Q9UIU6 AC068831.8-201ENST00000620171 435 ntBASIC4.47□□□□□ -1.69
SIX4Q9UIU6 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 AL445437.1-201ENST00000623157 3087 ntBASIC4.47□□□□□ -1.69
SIX4Q9UIU6 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SIX4Q9UIU6 AC010329.2-201ENST00000595195 2737 ntBASIC4.46□□□□□ -1.69
SIX4Q9UIU6 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.46□□□□□ -1.69
SIX4Q9UIU6 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.46□□□□□ -1.7
SIX4Q9UIU6 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SIX4Q9UIU6 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.46□□□□□ -1.7
SIX4Q9UIU6 AC083843.3-201ENST00000623679 2186 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 AC116667.1-201ENST00000604855 2072 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 Z95327.2-201ENST00000414579 1873 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 AC012321.1-201ENST00000561622 1588 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 ZNF876P-202ENST00000398732 1485 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SIX4Q9UIU6 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SIX4Q9UIU6 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SIX4Q9UIU6 RNA5SP130-201ENST00000364431 114 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.46□□□□□ -1.7
SIX4Q9UIU6 RNU1-13P-201ENST00000384499 162 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 RNU11-4P-201ENST00000391149 133 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 RPS26P8-201ENST00000393490 348 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 FABP12P1-201ENST00000401911 322 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 AL022722.2-201ENST00000402519 180 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 RNA5SP498-201ENST00000411342 120 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.46□□□□□ -1.7
SIX4Q9UIU6 AL356320.2-201ENST00000417263 507 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.46□□□□□ -1.7
SIX4Q9UIU6 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.46□□□□□ -1.7
SIX4Q9UIU6 OR6K4P-201ENST00000423179 955 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 RAC1P8-201ENST00000427086 527 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 AC022022.1-201ENST00000430304 178 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 OR4C10P-201ENST00000434991 931 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 RPL23AP46-201ENST00000438548 490 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.46□□□□□ -1.7
SIX4Q9UIU6 RPL23AP89-201ENST00000439324 255 ntBASIC4.46□□□□□ -1.7
SIX4Q9UIU6 RPS26P30-201ENST00000443431 335 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms