Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 NPM1P48-201ENST00000436002 853 ntBASIC3.26□□□□□ -1.89
CHD8Q9HCK8 AC126389.1-201ENST00000477436 290 ntBASIC3.26□□□□□ -1.89
CHD8Q9HCK8 RPS3AP43-201ENST00000479743 781 ntBASIC3.26□□□□□ -1.89
CHD8Q9HCK8 OR4A12P-201ENST00000530847 918 ntBASIC3.26□□□□□ -1.89
CHD8Q9HCK8 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.26□□□□□ -1.89
CHD8Q9HCK8 HIGD1AP1-201ENST00000550979 275 ntBASIC3.26□□□□□ -1.89
CHD8Q9HCK8 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC3.26□□□□□ -1.89
CHD8Q9HCK8 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.26□□□□□ -1.89
CHD8Q9HCK8 AL096803.3-201ENST00000609032 532 ntBASIC3.26□□□□□ -1.89
CHD8Q9HCK8 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.26□□□□□ -1.89
CHD8Q9HCK8 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
CHD8Q9HCK8 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CHD8Q9HCK8 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.26□□□□□ -1.89
CHD8Q9HCK8 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CHD8Q9HCK8 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.26□□□□□ -1.89
CHD8Q9HCK8 Y_RNA.122-201ENST00000363331 96 ntBASIC3.26□□□□□ -1.89
CHD8Q9HCK8 MIR499A-201ENST00000384903 122 ntBASIC3.26□□□□□ -1.89
CHD8Q9HCK8 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.26□□□□□ -1.89
CHD8Q9HCK8 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.26□□□□□ -1.89
CHD8Q9HCK8 AC108938.1-201ENST00000451204 136 ntBASIC3.26□□□□□ -1.89
CHD8Q9HCK8 RPL7P38-201ENST00000488396 739 ntBASIC3.26□□□□□ -1.89
CHD8Q9HCK8 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.26□□□□□ -1.89
CHD8Q9HCK8 MIR4660-201ENST00000583549 74 ntBASIC3.26□□□□□ -1.89
CHD8Q9HCK8 AC124312.4-201ENST00000605533 310 ntBASIC3.26□□□□□ -1.89
CHD8Q9HCK8 AP003355.3-201ENST00000623465 114 ntBASIC3.26□□□□□ -1.89
CHD8Q9HCK8 DDX6P1-205ENST00000441966 1436 ntBASIC3.26□□□□□ -1.89
CHD8Q9HCK8 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.26□□□□□ -1.89
CHD8Q9HCK8 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CHD8Q9HCK8 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
CHD8Q9HCK8 ELF2P3-201ENST00000445099 1506 ntBASIC3.25□□□□□ -1.89
CHD8Q9HCK8 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.25□□□□□ -1.89
CHD8Q9HCK8 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CHD8Q9HCK8 EIF4A1P1-201ENST00000420241 934 ntBASIC3.25□□□□□ -1.89
CHD8Q9HCK8 BX119904.3-201ENST00000428194 957 ntBASIC3.25□□□□□ -1.89
CHD8Q9HCK8 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.25□□□□□ -1.89
CHD8Q9HCK8 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.25□□□□□ -1.89
CHD8Q9HCK8 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC3.25□□□□□ -1.89
CHD8Q9HCK8 SNORA70.18-201ENST00000516696 98 ntBASIC3.25□□□□□ -1.89
CHD8Q9HCK8 AADACP1-206ENST00000561502 1193 ntBASIC3.25□□□□□ -1.89
CHD8Q9HCK8 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CHD8Q9HCK8 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CHD8Q9HCK8 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHD8Q9HCK8 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC3.25□□□□□ -1.89
CHD8Q9HCK8 AP000542.2-201ENST00000623199 6179 ntBASIC3.25□□□□□ -1.89
CHD8Q9HCK8 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHD8Q9HCK8 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHD8Q9HCK8 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHD8Q9HCK8 AC073073.2-201ENST00000609827 2578 ntBASIC3.25□□□□□ -1.89
CHD8Q9HCK8 RPL21P75-201ENST00000396599 483 ntBASIC3.25□□□□□ -1.89
CHD8Q9HCK8 RPL21P1-201ENST00000399532 476 ntBASIC3.25□□□□□ -1.89
CHD8Q9HCK8 RPL21P28-201ENST00000401418 483 ntBASIC3.25□□□□□ -1.89
CHD8Q9HCK8 AL592114.1-201ENST00000403842 483 ntBASIC3.25□□□□□ -1.89
CHD8Q9HCK8 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.25□□□□□ -1.89
CHD8Q9HCK8 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.25□□□□□ -1.89
CHD8Q9HCK8 RPL21P16-201ENST00000495531 483 ntBASIC3.25□□□□□ -1.89
CHD8Q9HCK8 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.25□□□□□ -1.89
CHD8Q9HCK8 RNVU1-4-201ENST00000612985 164 ntBASIC3.25□□□□□ -1.89
CHD8Q9HCK8 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.25□□□□□ -1.89
CHD8Q9HCK8 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.25□□□□□ -1.89
CHD8Q9HCK8 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHD8Q9HCK8 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CHD8Q9HCK8 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.24□□□□□ -1.89
CHD8Q9HCK8 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.24□□□□□ -1.89
CHD8Q9HCK8 AC007685.1-201ENST00000329806 452 ntBASIC3.24□□□□□ -1.89
CHD8Q9HCK8 RNA5SP99-201ENST00000364020 114 ntBASIC3.24□□□□□ -1.89
CHD8Q9HCK8 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.24□□□□□ -1.89
CHD8Q9HCK8 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.24□□□□□ -1.89
CHD8Q9HCK8 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.24□□□□□ -1.89
CHD8Q9HCK8 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.24□□□□□ -1.89
CHD8Q9HCK8 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.24□□□□□ -1.89
CHD8Q9HCK8 UBL5P2-201ENST00000583788 219 ntBASIC3.24□□□□□ -1.89
CHD8Q9HCK8 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.24□□□□□ -1.89
CHD8Q9HCK8 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.24□□□□□ -1.89
CHD8Q9HCK8 AC015922.4-201ENST00000612568 690 ntBASIC3.24□□□□□ -1.89
CHD8Q9HCK8 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CHD8Q9HCK8 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CHD8Q9HCK8 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
CHD8Q9HCK8 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CHD8Q9HCK8 AC097634.1-201ENST00000604491 2467 ntBASIC3.24□□□□□ -1.89
CHD8Q9HCK8 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.24□□□□□ -1.89
CHD8Q9HCK8 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.24□□□□□ -1.89
CHD8Q9HCK8 RNU1-18P-201ENST00000363062 164 ntBASIC3.24□□□□□ -1.89
CHD8Q9HCK8 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CHD8Q9HCK8 HMGN1P24-201ENST00000412282 298 ntBASIC3.24□□□□□ -1.89
CHD8Q9HCK8 AL353705.1-201ENST00000433468 480 ntBASIC3.24□□□□□ -1.89
CHD8Q9HCK8 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.24□□□□□ -1.89
CHD8Q9HCK8 RPL23AP70-201ENST00000483361 460 ntBASIC3.24□□□□□ -1.89
CHD8Q9HCK8 AP000926.3-201ENST00000497201 299 ntBASIC3.24□□□□□ -1.89
CHD8Q9HCK8 AC108941.1-201ENST00000502853 530 ntBASIC3.24□□□□□ -1.89
CHD8Q9HCK8 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.24□□□□□ -1.89
CHD8Q9HCK8 AC005476.1-201ENST00000554427 397 ntBASIC3.24□□□□□ -1.89
CHD8Q9HCK8 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC3.24□□□□□ -1.89
CHD8Q9HCK8 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.24□□□□□ -1.89
CHD8Q9HCK8 AP001004.1-201ENST00000582468 324 ntBASIC3.24□□□□□ -1.89
CHD8Q9HCK8 MIR4781-201ENST00000585250 76 ntBASIC3.24□□□□□ -1.89
CHD8Q9HCK8 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
CHD8Q9HCK8 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CHD8Q9HCK8 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CHD8Q9HCK8 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CHD8Q9HCK8 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms