Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AP001086.1-201ENST00000494882 321 ntBASIC6.47□□□□□ -1.37
USB1Q9BQ65 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC6.47□□□□□ -1.37
USB1Q9BQ65 HMGB1P21-201ENST00000502313 581 ntBASIC6.47□□□□□ -1.37
USB1Q9BQ65 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC6.47□□□□□ -1.37
USB1Q9BQ65 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC6.47□□□□□ -1.37
USB1Q9BQ65 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.47□□□□□ -1.37
USB1Q9BQ65 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.47□□□□□ -1.37
USB1Q9BQ65 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC6.47□□□□□ -1.37
USB1Q9BQ65 IGHV1OR15-3-201ENST00000564926 351 ntBASIC6.47□□□□□ -1.37
USB1Q9BQ65 RN7SL689P-201ENST00000577215 297 ntBASIC6.47□□□□□ -1.37
USB1Q9BQ65 MIR3133-201ENST00000583157 78 ntBASIC6.47□□□□□ -1.37
USB1Q9BQ65 AL589765.5-201ENST00000596133 515 ntBASIC6.47□□□□□ -1.37
USB1Q9BQ65 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
USB1Q9BQ65 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC6.47□□□□□ -1.37
USB1Q9BQ65 JAML-213ENST00000640745 951 ntTSL 5 BASIC6.47□□□□□ -1.37
USB1Q9BQ65 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USB1Q9BQ65 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC6.47□□□□□ -1.37
USB1Q9BQ65 MAPK10-383ENST00000642032 3390 ntBASIC6.47□□□□□ -1.37
USB1Q9BQ65 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
USB1Q9BQ65 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
USB1Q9BQ65 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USB1Q9BQ65 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
USB1Q9BQ65 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
USB1Q9BQ65 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
USB1Q9BQ65 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
USB1Q9BQ65 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USB1Q9BQ65 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
USB1Q9BQ65 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.46□□□□□ -1.37
USB1Q9BQ65 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.37
USB1Q9BQ65 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
USB1Q9BQ65 CDC27P2-201ENST00000425026 1922 ntBASIC6.46□□□□□ -1.37
USB1Q9BQ65 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
USB1Q9BQ65 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.37
USB1Q9BQ65 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
USB1Q9BQ65 OSBPL9P4-201ENST00000371707 1800 ntBASIC6.46□□□□□ -1.37
USB1Q9BQ65 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.46□□□□□ -1.37
USB1Q9BQ65 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
USB1Q9BQ65 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
USB1Q9BQ65 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC6.46□□□□□ -1.37
USB1Q9BQ65 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
USB1Q9BQ65 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
USB1Q9BQ65 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.46□□□□□ -1.38
USB1Q9BQ65 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
USB1Q9BQ65 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
USB1Q9BQ65 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.46□□□□□ -1.38
USB1Q9BQ65 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
USB1Q9BQ65 RNU6-280P-201ENST00000364145 104 ntBASIC6.46□□□□□ -1.38
USB1Q9BQ65 RNU6-1078P-201ENST00000364522 103 ntBASIC6.46□□□□□ -1.38
USB1Q9BQ65 RNU4-42P-201ENST00000364738 142 ntBASIC6.46□□□□□ -1.38
USB1Q9BQ65 RNA5SP355-201ENST00000365317 135 ntBASIC6.46□□□□□ -1.38
USB1Q9BQ65 RNU6-398P-201ENST00000384143 109 ntBASIC6.46□□□□□ -1.38
USB1Q9BQ65 Y_RNA.526-201ENST00000384572 110 ntBASIC6.46□□□□□ -1.38
USB1Q9BQ65 MIR137-201ENST00000385223 102 ntBASIC6.46□□□□□ -1.38
USB1Q9BQ65 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
USB1Q9BQ65 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.46□□□□□ -1.38
USB1Q9BQ65 AL158071.1-201ENST00000430315 461 ntBASIC6.46□□□□□ -1.38
USB1Q9BQ65 AL445928.1-201ENST00000435545 222 ntBASIC6.46□□□□□ -1.38
USB1Q9BQ65 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.46□□□□□ -1.38
USB1Q9BQ65 SNORA35.1-201ENST00000458908 128 ntBASIC6.46□□□□□ -1.38
USB1Q9BQ65 RN7SL251P-201ENST00000464175 297 ntBASIC6.46□□□□□ -1.38
USB1Q9BQ65 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC6.46□□□□□ -1.38
USB1Q9BQ65 RN7SL751P-201ENST00000473281 284 ntBASIC6.46□□□□□ -1.38
USB1Q9BQ65 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC6.46□□□□□ -1.38
USB1Q9BQ65 RPL17P19-201ENST00000489069 552 ntBASIC6.46□□□□□ -1.38
USB1Q9BQ65 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC6.46□□□□□ -1.38
USB1Q9BQ65 AC022296.2-201ENST00000512424 202 ntBASIC6.46□□□□□ -1.38
USB1Q9BQ65 AC060775.1-201ENST00000518241 520 ntBASIC6.46□□□□□ -1.38
USB1Q9BQ65 AP004607.5-201ENST00000532034 217 ntBASIC6.46□□□□□ -1.38
USB1Q9BQ65 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.46□□□□□ -1.38
USB1Q9BQ65 AC025423.5-201ENST00000550230 219 ntBASIC6.46□□□□□ -1.38
USB1Q9BQ65 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.46□□□□□ -1.38
USB1Q9BQ65 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC6.46□□□□□ -1.38
USB1Q9BQ65 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC6.46□□□□□ -1.38
USB1Q9BQ65 AC138915.4-201ENST00000565549 4147 ntBASIC6.46□□□□□ -1.38
USB1Q9BQ65 AC109446.1-201ENST00000566172 220 ntBASIC6.46□□□□□ -1.38
USB1Q9BQ65 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.46□□□□□ -1.38
USB1Q9BQ65 RPL23AP84-201ENST00000571193 464 ntBASIC6.46□□□□□ -1.38
USB1Q9BQ65 AC130289.1-201ENST00000577321 73 ntBASIC6.46□□□□□ -1.38
USB1Q9BQ65 MIR1273F-201ENST00000580581 99 ntBASIC6.46□□□□□ -1.38
USB1Q9BQ65 GLYATL1P2-202ENST00000588046 902 ntBASIC6.46□□□□□ -1.38
USB1Q9BQ65 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.46□□□□□ -1.38
USB1Q9BQ65 PSMA6P4-201ENST00000603247 718 ntBASIC6.46□□□□□ -1.38
USB1Q9BQ65 AL513218.1-201ENST00000606527 391 ntBASIC6.46□□□□□ -1.38
USB1Q9BQ65 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.46□□□□□ -1.38
USB1Q9BQ65 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.46□□□□□ -1.38
USB1Q9BQ65 AC132825.6-201ENST00000638861 357 ntBASIC6.46□□□□□ -1.38
USB1Q9BQ65 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
USB1Q9BQ65 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
USB1Q9BQ65 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
USB1Q9BQ65 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
USB1Q9BQ65 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
USB1Q9BQ65 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
USB1Q9BQ65 SF3A3P1-201ENST00000446317 1477 ntBASIC6.46□□□□□ -1.38
USB1Q9BQ65 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.46□□□□□ -1.38
USB1Q9BQ65 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
USB1Q9BQ65 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
USB1Q9BQ65 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
USB1Q9BQ65 AC022034.1-201ENST00000512867 2156 ntBASIC6.45□□□□□ -1.38
USB1Q9BQ65 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
USB1Q9BQ65 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms