Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC3.38□□□□□ -1.87
LITAFQ99732 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC3.38□□□□□ -1.87
LITAFQ99732 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC3.38□□□□□ -1.87
LITAFQ99732 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC3.38□□□□□ -1.87
LITAFQ99732 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC3.38□□□□□ -1.87
LITAFQ99732 PRELID3BP8-201ENST00000604148 295 ntBASIC3.38□□□□□ -1.87
LITAFQ99732 AL133338.2-201ENST00000604292 736 ntBASIC3.38□□□□□ -1.87
LITAFQ99732 AC097468.3-201ENST00000607956 456 ntBASIC3.38□□□□□ -1.87
LITAFQ99732 AP005432.2-201ENST00000608162 586 ntBASIC3.38□□□□□ -1.87
LITAFQ99732 AC078899.5-201ENST00000612475 178 ntBASIC3.38□□□□□ -1.87
LITAFQ99732 AC022306.2-201ENST00000617563 647 ntBASIC3.38□□□□□ -1.87
LITAFQ99732 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.38□□□□□ -1.87
LITAFQ99732 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.38□□□□□ -1.87
LITAFQ99732 SEPT14P19-203ENST00000633205 211 ntBASIC3.38□□□□□ -1.87
LITAFQ99732 CRYM-AS1-204ENST00000637983 556 ntBASIC3.38□□□□□ -1.87
LITAFQ99732 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LITAFQ99732 AC093775.1-201ENST00000624154 1868 ntBASIC3.38□□□□□ -1.87
LITAFQ99732 AC117529.2-201ENST00000512159 2068 ntBASIC3.38□□□□□ -1.87
LITAFQ99732 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LITAFQ99732 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LITAFQ99732 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
LITAFQ99732 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.38□□□□□ -1.87
LITAFQ99732 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
LITAFQ99732 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.38□□□□□ -1.87
LITAFQ99732 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC3.38□□□□□ -1.87
LITAFQ99732 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.38□□□□□ -1.87
LITAFQ99732 XPOTP1-201ENST00000443317 2398 ntBASIC3.38□□□□□ -1.87
LITAFQ99732 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LITAFQ99732 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
LITAFQ99732 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
LITAFQ99732 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
LITAFQ99732 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
LITAFQ99732 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LITAFQ99732 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC3.37□□□□□ -1.87
LITAFQ99732 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LITAFQ99732 AL359922.3-201ENST00000624779 1670 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LITAFQ99732 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
LITAFQ99732 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LITAFQ99732 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC3.37□□□□□ -1.87
LITAFQ99732 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
LITAFQ99732 AC107068.1-201ENST00000563286 4218 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LITAFQ99732 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.37□□□□□ -1.87
LITAFQ99732 RNA5SP273-201ENST00000362484 113 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 RNU1-20P-201ENST00000363314 162 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 RNA5SP28-201ENST00000363841 119 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 RNU6-777P-201ENST00000364265 104 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 RNU6-441P-201ENST00000384545 106 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
LITAFQ99732 U8.14-201ENST00000390843 143 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 Y_RNA.582-201ENST00000391023 95 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 HMGB1P17-201ENST00000403495 628 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 OR4K12P-201ENST00000406538 961 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.37□□□□□ -1.87
LITAFQ99732 Y_RNA.604-201ENST00000410574 102 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 RNU6-248P-201ENST00000410720 107 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.37□□□□□ -1.87
LITAFQ99732 MTND1P21-201ENST00000412991 285 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC3.37□□□□□ -1.87
LITAFQ99732 AC004690.1-201ENST00000418216 328 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.37□□□□□ -1.87
LITAFQ99732 IPMKP1-201ENST00000425988 855 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 AL356583.2-201ENST00000426536 280 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC3.37□□□□□ -1.87
LITAFQ99732 RPL36P19-201ENST00000430744 301 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 MRPS10P2-201ENST00000431226 381 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 RPEP4-201ENST00000437636 602 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 SNRPEP7-201ENST00000438350 220 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 LSM1P1-201ENST00000438629 273 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC3.37□□□□□ -1.87
LITAFQ99732 AC092013.1-201ENST00000438795 332 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 DNAJC19P4-201ENST00000440115 345 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC3.37□□□□□ -1.87
LITAFQ99732 TDGF1P1-201ENST00000445734 527 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 AL033528.1-201ENST00000453780 140 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.37□□□□□ -1.87
LITAFQ99732 RNU7-136P-201ENST00000458819 69 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.37□□□□□ -1.87
LITAFQ99732 KLF3P2-201ENST00000465138 268 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 AC023194.2-201ENST00000465398 406 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 RPS15AP17-201ENST00000470598 390 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 AC074386.1-201ENST00000476560 767 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 TMED11P-201ENST00000479478 690 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.37□□□□□ -1.87
LITAFQ99732 LARP1BP2-201ENST00000486594 519 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 AL117692.1-201ENST00000494283 713 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 RPS4XP18-201ENST00000495480 763 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.37□□□□□ -1.87
LITAFQ99732 POU5F1P7-201ENST00000508759 541 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LITAFQ99732 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC3.37□□□□□ -1.87
LITAFQ99732 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LITAFQ99732 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC3.37□□□□□ -1.87
LITAFQ99732 AC138517.1-201ENST00000515724 568 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 RNU6-615P-201ENST00000516065 106 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 RNU6-1178P-201ENST00000516674 107 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 PAICSP4-201ENST00000517543 1253 ntBASIC3.37□□□□□ -1.87
LITAFQ99732 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LITAFQ99732 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms