Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.44□□□□□ -1.54
NUP88Q99567 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.44□□□□□ -1.54
NUP88Q99567 AC009643.1-201ENST00000532030 391 ntBASIC5.44□□□□□ -1.54
NUP88Q99567 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.44□□□□□ -1.54
NUP88Q99567 AC002400.1-201ENST00000569310 726 ntBASIC5.44□□□□□ -1.54
NUP88Q99567 AP005119.2-201ENST00000579735 1105 ntBASIC5.44□□□□□ -1.54
NUP88Q99567 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.44□□□□□ -1.54
NUP88Q99567 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NUP88Q99567 AL592148.3-201ENST00000608771 2646 ntBASIC5.44□□□□□ -1.54
NUP88Q99567 AC073348.1-201ENST00000623002 331 ntBASIC5.44□□□□□ -1.54
NUP88Q99567 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
NUP88Q99567 AL049536.1-201ENST00000625043 744 ntBASIC5.44□□□□□ -1.54
NUP88Q99567 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
NUP88Q99567 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NUP88Q99567 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NUP88Q99567 MTND5P31-201ENST00000419366 1374 ntBASIC5.43□□□□□ -1.54
NUP88Q99567 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
NUP88Q99567 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NUP88Q99567 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NUP88Q99567 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.43□□□□□ -1.54
NUP88Q99567 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NUP88Q99567 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NUP88Q99567 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
NUP88Q99567 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.43□□□□□ -1.54
NUP88Q99567 AC068538.1-201ENST00000376856 336 ntBASIC5.43□□□□□ -1.54
NUP88Q99567 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
NUP88Q99567 RN7SKP267-201ENST00000410381 285 ntBASIC5.43□□□□□ -1.54
NUP88Q99567 RNU4-72P-201ENST00000410754 173 ntBASIC5.43□□□□□ -1.54
NUP88Q99567 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.43□□□□□ -1.54
NUP88Q99567 E2F6P2-201ENST00000420708 748 ntBASIC5.43□□□□□ -1.54
NUP88Q99567 USP9YP26-201ENST00000421008 661 ntBASIC5.43□□□□□ -1.54
NUP88Q99567 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP88Q99567 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP88Q99567 YWHAZP7-201ENST00000436906 631 ntBASIC5.43□□□□□ -1.54
NUP88Q99567 YWHAZP8-201ENST00000436935 731 ntBASIC5.43□□□□□ -1.54
NUP88Q99567 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP88Q99567 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.43□□□□□ -1.54
NUP88Q99567 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP88Q99567 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP88Q99567 RPL21P71-201ENST00000465598 459 ntBASIC5.43□□□□□ -1.54
NUP88Q99567 RPL5P23-201ENST00000496040 868 ntBASIC5.43□□□□□ -1.54
NUP88Q99567 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NUP88Q99567 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP88Q99567 SNORA48.10-201ENST00000516965 160 ntBASIC5.43□□□□□ -1.54
NUP88Q99567 AC105185.1-201ENST00000518705 535 ntBASIC5.43□□□□□ -1.54
NUP88Q99567 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.43□□□□□ -1.54
NUP88Q99567 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.43□□□□□ -1.54
NUP88Q99567 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP88Q99567 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.43□□□□□ -1.54
NUP88Q99567 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.43□□□□□ -1.54
NUP88Q99567 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP88Q99567 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.43□□□□□ -1.54
NUP88Q99567 AL139418.1-201ENST00000613613 177 ntBASIC5.43□□□□□ -1.54
NUP88Q99567 AC123768.4-201ENST00000616244 701 ntBASIC5.43□□□□□ -1.54
NUP88Q99567 AC243756.2-201ENST00000618406 463 ntBASIC5.43□□□□□ -1.54
NUP88Q99567 AL607023.1-201ENST00000620045 248 ntBASIC5.43□□□□□ -1.54
NUP88Q99567 AC004777.1-201ENST00000624317 287 ntBASIC5.43□□□□□ -1.54
NUP88Q99567 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP88Q99567 U3.53-201ENST00000628922 216 ntBASIC5.43□□□□□ -1.54
NUP88Q99567 AC103706.2-201ENST00000638080 240 ntBASIC5.43□□□□□ -1.54
NUP88Q99567 MKKS-204ENST00000639674 192 ntBASIC5.43□□□□□ -1.54
NUP88Q99567 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
NUP88Q99567 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NUP88Q99567 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NUP88Q99567 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
NUP88Q99567 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NUP88Q99567 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.43□□□□□ -1.54
NUP88Q99567 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NUP88Q99567 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.43□□□□□ -1.54
NUP88Q99567 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
NUP88Q99567 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NUP88Q99567 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.42□□□□□ -1.54
NUP88Q99567 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NUP88Q99567 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
NUP88Q99567 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NUP88Q99567 XPOTP1-201ENST00000443317 2398 ntBASIC5.42□□□□□ -1.54
NUP88Q99567 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
NUP88Q99567 AC021146.4-201ENST00000309229 279 ntBASIC5.42□□□□□ -1.54
NUP88Q99567 RNA5SP391-201ENST00000363456 119 ntBASIC5.42□□□□□ -1.54
NUP88Q99567 AL121978.1-201ENST00000402778 359 ntBASIC5.42□□□□□ -1.54
NUP88Q99567 MTCO3P31-201ENST00000405526 789 ntBASIC5.42□□□□□ -1.54
NUP88Q99567 ELOCP19-201ENST00000411919 318 ntBASIC5.42□□□□□ -1.54
NUP88Q99567 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.42□□□□□ -1.54
NUP88Q99567 AC098592.1-201ENST00000419352 333 ntBASIC5.42□□□□□ -1.54
NUP88Q99567 RPL7P57-201ENST00000423238 740 ntBASIC5.42□□□□□ -1.54
NUP88Q99567 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.42□□□□□ -1.54
NUP88Q99567 CHIAP3-201ENST00000423668 1133 ntBASIC5.42□□□□□ -1.54
NUP88Q99567 RPP40P1-201ENST00000426762 456 ntBASIC5.42□□□□□ -1.54
NUP88Q99567 RPL31P54-201ENST00000429803 370 ntBASIC5.42□□□□□ -1.54
NUP88Q99567 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.42□□□□□ -1.54
NUP88Q99567 UBE2D3P1-201ENST00000436669 444 ntBASIC5.42□□□□□ -1.54
NUP88Q99567 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.42□□□□□ -1.54
NUP88Q99567 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.42□□□□□ -1.54
NUP88Q99567 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.42□□□□□ -1.54
NUP88Q99567 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NUP88Q99567 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.42□□□□□ -1.54
NUP88Q99567 EIF4A1P11-201ENST00000451239 222 ntBASIC5.42□□□□□ -1.54
NUP88Q99567 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.42□□□□□ -1.54
NUP88Q99567 HMGN3P1-201ENST00000453847 193 ntBASIC5.42□□□□□ -1.54
NUP88Q99567 AC112206.1-201ENST00000468416 477 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms