Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AL451049.1-201ENST00000608672 497 ntBASIC7.06□□□□□ -1.28
TRIM47Q96LD4 RMST_5.1-201ENST00000618704 126 ntBASIC7.06□□□□□ -1.28
TRIM47Q96LD4 AC024023.1-201ENST00000624530 922 ntBASIC7.06□□□□□ -1.28
TRIM47Q96LD4 AC063952.1-203ENST00000634410 658 ntBASIC7.06□□□□□ -1.28
TRIM47Q96LD4 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.06□□□□□ -1.28
TRIM47Q96LD4 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC7.06□□□□□ -1.28
TRIM47Q96LD4 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC7.06□□□□□ -1.28
TRIM47Q96LD4 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
TRIM47Q96LD4 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
TRIM47Q96LD4 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.06□□□□□ -1.28
TRIM47Q96LD4 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
TRIM47Q96LD4 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
TRIM47Q96LD4 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
TRIM47Q96LD4 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
TRIM47Q96LD4 AC139426.3-201ENST00000605648 2059 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 MTND5P7-201ENST00000413558 1798 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.05□□□□□ -1.28
TRIM47Q96LD4 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7.05□□□□□ -1.28
TRIM47Q96LD4 AC011416.1-201ENST00000514947 1732 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC7.05□□□□□ -1.28
TRIM47Q96LD4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
TRIM47Q96LD4 GAPDHP24-201ENST00000328713 983 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 MIR375-201ENST00000362103 64 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 RNU6-462P-201ENST00000362659 105 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 RN7SKP162-201ENST00000363605 345 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 CRP-204ENST00000368112 787 ntTSL 2 BASIC7.05□□□□□ -1.28
TRIM47Q96LD4 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
TRIM47Q96LD4 SPTLC1P2-201ENST00000407089 121 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 BTF3P9-201ENST00000418784 283 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 DUTP6-201ENST00000425573 462 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 DNAJC19P7-201ENST00000428811 344 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 AC109583.1-201ENST00000432156 268 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 MTND5P15-201ENST00000434246 349 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 PRPF38AP2-201ENST00000438179 851 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 BNIP3P2-201ENST00000441221 577 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC7.05□□□□□ -1.28
TRIM47Q96LD4 AC007547.1-201ENST00000462177 490 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 AC112206.1-201ENST00000468416 477 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 AC128713.1-201ENST00000471495 306 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 AC078785.3-201ENST00000476607 425 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 RPL38P3-201ENST00000484463 213 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 AC106872.2-201ENST00000494303 480 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 AC015911.1-201ENST00000495111 156 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 EIF4EP3-201ENST00000498782 656 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 AK3P4-201ENST00000504283 583 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 AC108043.1-201ENST00000512696 574 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 SNORA25.10-201ENST00000515926 124 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 RNU6-976P-201ENST00000516086 111 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 SNORA48.10-201ENST00000516965 160 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 CDC42P3-201ENST00000518493 633 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC7.05□□□□□ -1.28
TRIM47Q96LD4 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC7.05□□□□□ -1.28
TRIM47Q96LD4 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.05□□□□□ -1.28
TRIM47Q96LD4 POLR2KP1-201ENST00000553226 168 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 OR4T1P-201ENST00000554933 911 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 AC044860.2-201ENST00000561005 179 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC7.05□□□□□ -1.28
TRIM47Q96LD4 AC009120.3-201ENST00000563335 499 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 AC138915.2-201ENST00000569776 97 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC7.05□□□□□ -1.28
TRIM47Q96LD4 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC7.05□□□□□ -1.28
TRIM47Q96LD4 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC7.05□□□□□ -1.28
TRIM47Q96LD4 AC245389.1-201ENST00000605141 529 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 AC118658.2-201ENST00000618697 459 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 AC009161.2-201ENST00000624626 138 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 MAPK10-270ENST00000641102 3538 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
TRIM47Q96LD4 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
TRIM47Q96LD4 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
TRIM47Q96LD4 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
TRIM47Q96LD4 MAPK10-287ENST00000641217 3037 ntBASIC7.05□□□□□ -1.28
TRIM47Q96LD4 OR5BR1P-201ENST00000524992 1330 ntBASIC7.04□□□□□ -1.28
TRIM47Q96LD4 ACTR3BP2-202ENST00000623630 1338 ntBASIC7.04□□□□□ -1.28
TRIM47Q96LD4 AP004289.1-201ENST00000436307 2205 ntBASIC7.04□□□□□ -1.28
TRIM47Q96LD4 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
TRIM47Q96LD4 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
TRIM47Q96LD4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TRIM47Q96LD4 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TRIM47Q96LD4 AC027088.4-201ENST00000611559 1947 ntBASIC7.04□□□□□ -1.28
TRIM47Q96LD4 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC7.04□□□□□ -1.28
TRIM47Q96LD4 AL512646.1-201ENST00000269395 1077 ntBASIC7.04□□□□□ -1.28
TRIM47Q96LD4 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.04□□□□□ -1.28
TRIM47Q96LD4 RNU4-2-201ENST00000365668 141 ntBASIC7.04□□□□□ -1.28
TRIM47Q96LD4 FGFR1OP2P1-201ENST00000395943 500 ntBASIC7.04□□□□□ -1.28
TRIM47Q96LD4 AL583835.1-201ENST00000399570 407 ntBASIC7.04□□□□□ -1.28
TRIM47Q96LD4 GAPDHP42-201ENST00000406848 981 ntBASIC7.04□□□□□ -1.28
TRIM47Q96LD4 RNU4-34P-201ENST00000410431 124 ntBASIC7.04□□□□□ -1.28
TRIM47Q96LD4 RBMY2KP-201ENST00000418221 992 ntBASIC7.04□□□□□ -1.28
TRIM47Q96LD4 IGKV1OR9-1-201ENST00000424370 284 ntBASIC7.04□□□□□ -1.28
TRIM47Q96LD4 NRBF2P3-201ENST00000432731 865 ntBASIC7.04□□□□□ -1.28
TRIM47Q96LD4 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC7.04□□□□□ -1.28
TRIM47Q96LD4 FABP5P14-201ENST00000437273 393 ntBASIC7.04□□□□□ -1.28
TRIM47Q96LD4 GAPDHP58-201ENST00000438477 1006 ntBASIC7.04□□□□□ -1.28
TRIM47Q96LD4 AC015983.1-201ENST00000441577 373 ntBASIC7.04□□□□□ -1.28
TRIM47Q96LD4 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC7.04□□□□□ -1.28
TRIM47Q96LD4 AC103563.5-201ENST00000455643 364 ntBASIC7.04□□□□□ -1.28
TRIM47Q96LD4 RPL5P30-201ENST00000465511 891 ntBASIC7.04□□□□□ -1.28
TRIM47Q96LD4 PFN1P6-201ENST00000476786 399 ntBASIC7.04□□□□□ -1.28
TRIM47Q96LD4 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC7.04□□□□□ -1.28
TRIM47Q96LD4 AC112204.1-201ENST00000502591 103 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms