Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RPL7P48-201ENST00000461513 746 ntBASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 SYT14P1-201ENST00000481459 721 ntBASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 AC109458.1-201ENST00000508858 316 ntBASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 AC093770.1-201ENST00000511559 571 ntBASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 SAP18P1-201ENST00000512058 390 ntBASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 RNA5SP208-201ENST00000516156 78 ntBASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 SUMO2P20-201ENST00000520803 283 ntBASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 AC112230.1-201ENST00000604342 547 ntBASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 AC010680.4-201ENST00000605334 543 ntBASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 AC103858.2-201ENST00000621471 543 ntBASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 AC039056.2-201ENST00000622261 511 ntBASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 C2orf27A-204ENST00000623058 969 ntBASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 AC034229.5-201ENST00000624258 185 ntBASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 AP001486.2-201ENST00000561652 5113 ntBASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 AC138393.1-206ENST00000540997 1886 ntBASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ECHDC3Q96DC8 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 AC007066.1-201ENST00000392902 381 ntBASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 RNU6ATAC-201ENST00000408749 126 ntBASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 AC092832.1-201ENST00000422934 400 ntBASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 MTND2P11-201ENST00000423638 648 ntBASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 AL035246.1-201ENST00000433554 1255 ntBASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 AL031663.1-201ENST00000437445 219 ntBASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 YWHAQP9-201ENST00000445891 512 ntBASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 AC006480.1-201ENST00000449887 378 ntBASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 UBE2CP3-201ENST00000502715 450 ntBASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 USP9YP5-201ENST00000511770 630 ntBASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 IGKV2D-23-201ENST00000518179 286 ntBASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 AC067852.4-201ENST00000590314 478 ntBASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 AL121772.2-201ENST00000614331 297 ntBASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 AC015726.3-201ENST00000624501 418 ntBASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 OR5AC4P-202ENST00000642086 985 ntBASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
ECHDC3Q96DC8 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
ECHDC3Q96DC8 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.77□□□□□ -1.81
ECHDC3Q96DC8 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ECHDC3Q96DC8 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.77□□□□□ -1.81
ECHDC3Q96DC8 DCAF13P3-201ENST00000561147 1334 ntBASIC3.77□□□□□ -1.81
ECHDC3Q96DC8 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
ECHDC3Q96DC8 RNA5SP124-201ENST00000362739 110 ntBASIC3.77□□□□□ -1.81
ECHDC3Q96DC8 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.77□□□□□ -1.81
ECHDC3Q96DC8 MIR554-201ENST00000384874 96 ntBASIC3.77□□□□□ -1.81
ECHDC3Q96DC8 AL590704.1-201ENST00000402856 794 ntBASIC3.77□□□□□ -1.81
ECHDC3Q96DC8 AL138878.1-201ENST00000405131 347 ntBASIC3.77□□□□□ -1.81
ECHDC3Q96DC8 RFESDP1-201ENST00000422350 461 ntBASIC3.77□□□□□ -1.81
ECHDC3Q96DC8 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.77□□□□□ -1.81
ECHDC3Q96DC8 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.77□□□□□ -1.81
ECHDC3Q96DC8 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ECHDC3Q96DC8 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.77□□□□□ -1.81
ECHDC3Q96DC8 AL133547.1-201ENST00000448546 220 ntBASIC3.77□□□□□ -1.81
ECHDC3Q96DC8 AP002345.1-201ENST00000456493 928 ntBASIC3.77□□□□□ -1.81
ECHDC3Q96DC8 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.77□□□□□ -1.81
ECHDC3Q96DC8 AC018635.1-201ENST00000468292 1030 ntBASIC3.77□□□□□ -1.81
ECHDC3Q96DC8 AC022034.3-201ENST00000471393 478 ntBASIC3.77□□□□□ -1.81
ECHDC3Q96DC8 SUMO1P1-201ENST00000497904 306 ntBASIC3.77□□□□□ -1.81
ECHDC3Q96DC8 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.77□□□□□ -1.81
ECHDC3Q96DC8 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.77□□□□□ -1.81
ECHDC3Q96DC8 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.77□□□□□ -1.81
ECHDC3Q96DC8 RNU1-45P-201ENST00000517191 141 ntBASIC3.77□□□□□ -1.81
ECHDC3Q96DC8 MED28P5-201ENST00000528254 438 ntBASIC3.77□□□□□ -1.81
ECHDC3Q96DC8 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.77□□□□□ -1.81
ECHDC3Q96DC8 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms