Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC007656.2-201ENST00000624902 4547 ntBASIC4.33□□□□□ -1.72
RTL9Q8NET4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RTL9Q8NET4 AC017007.4-201ENST00000503353 1352 ntBASIC4.32□□□□□ -1.72
RTL9Q8NET4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.32□□□□□ -1.72
RTL9Q8NET4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RTL9Q8NET4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.32□□□□□ -1.72
RTL9Q8NET4 ZNF603P-201ENST00000405613 487 ntBASIC4.32□□□□□ -1.72
RTL9Q8NET4 RN7SKP56-201ENST00000410513 331 ntBASIC4.32□□□□□ -1.72
RTL9Q8NET4 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.32□□□□□ -1.72
RTL9Q8NET4 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.32□□□□□ -1.72
RTL9Q8NET4 RPS20P1-201ENST00000434853 354 ntBASIC4.32□□□□□ -1.72
RTL9Q8NET4 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.32□□□□□ -1.72
RTL9Q8NET4 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.32□□□□□ -1.72
RTL9Q8NET4 HMGB1P16-201ENST00000447155 540 ntBASIC4.32□□□□□ -1.72
RTL9Q8NET4 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.32□□□□□ -1.72
RTL9Q8NET4 AL162388.1-201ENST00000450912 352 ntBASIC4.32□□□□□ -1.72
RTL9Q8NET4 ANP32BP2-201ENST00000454525 545 ntBASIC4.32□□□□□ -1.72
RTL9Q8NET4 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.32□□□□□ -1.72
RTL9Q8NET4 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.32□□□□□ -1.72
RTL9Q8NET4 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.32□□□□□ -1.72
RTL9Q8NET4 AC011611.1-201ENST00000552179 197 ntBASIC4.32□□□□□ -1.72
RTL9Q8NET4 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.32□□□□□ -1.72
RTL9Q8NET4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.32□□□□□ -1.72
RTL9Q8NET4 AC107027.3-201ENST00000565095 3473 ntBASIC4.32□□□□□ -1.72
RTL9Q8NET4 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RTL9Q8NET4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RTL9Q8NET4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
RTL9Q8NET4 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RTL9Q8NET4 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RTL9Q8NET4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
RTL9Q8NET4 OR4G1P-202ENST00000641173 1788 ntBASIC4.32□□□□□ -1.72
RTL9Q8NET4 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RTL9Q8NET4 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RTL9Q8NET4 RNA5SP322-201ENST00000363617 119 ntBASIC4.31□□□□□ -1.72
RTL9Q8NET4 SNORA38.1-201ENST00000364172 131 ntBASIC4.31□□□□□ -1.72
RTL9Q8NET4 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RTL9Q8NET4 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.31□□□□□ -1.72
RTL9Q8NET4 AJ239321.1-201ENST00000424255 564 ntBASIC4.31□□□□□ -1.72
RTL9Q8NET4 RPL7P44-201ENST00000424827 742 ntBASIC4.31□□□□□ -1.72
RTL9Q8NET4 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.31□□□□□ -1.72
RTL9Q8NET4 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.31□□□□□ -1.72
RTL9Q8NET4 AC107015.1-201ENST00000466902 747 ntBASIC4.31□□□□□ -1.72
RTL9Q8NET4 AC084357.1-201ENST00000473404 255 ntBASIC4.31□□□□□ -1.72
RTL9Q8NET4 NPM1P17-201ENST00000479221 602 ntBASIC4.31□□□□□ -1.72
RTL9Q8NET4 RPL7P23-201ENST00000493874 747 ntBASIC4.31□□□□□ -1.72
RTL9Q8NET4 HMGB3P14-201ENST00000494195 599 ntBASIC4.31□□□□□ -1.72
RTL9Q8NET4 PHBP14-201ENST00000512887 367 ntBASIC4.31□□□□□ -1.72
RTL9Q8NET4 RN7SKP83-201ENST00000516512 178 ntBASIC4.31□□□□□ -1.72
RTL9Q8NET4 IGKV2-26-201ENST00000518305 343 ntBASIC4.31□□□□□ -1.72
RTL9Q8NET4 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.31□□□□□ -1.72
RTL9Q8NET4 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.31□□□□□ -1.72
RTL9Q8NET4 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.31□□□□□ -1.72
RTL9Q8NET4 AC025946.2-201ENST00000603398 234 ntBASIC4.31□□□□□ -1.72
RTL9Q8NET4 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.31□□□□□ -1.72
RTL9Q8NET4 AC078899.5-201ENST00000612475 178 ntBASIC4.31□□□□□ -1.72
RTL9Q8NET4 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RTL9Q8NET4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RTL9Q8NET4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.3□□□□□ -1.72
RTL9Q8NET4 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
RTL9Q8NET4 RNU1-18P-201ENST00000363062 164 ntBASIC4.3□□□□□ -1.72
RTL9Q8NET4 RNU6-283P-201ENST00000364788 107 ntBASIC4.3□□□□□ -1.72
RTL9Q8NET4 SNORA48.5-201ENST00000391143 135 ntBASIC4.3□□□□□ -1.72
RTL9Q8NET4 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.3□□□□□ -1.72
RTL9Q8NET4 RPF2P1-201ENST00000424137 906 ntBASIC4.3□□□□□ -1.72
RTL9Q8NET4 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
RTL9Q8NET4 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.3□□□□□ -1.72
RTL9Q8NET4 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.3□□□□□ -1.72
RTL9Q8NET4 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.3□□□□□ -1.72
RTL9Q8NET4 AC125494.3-201ENST00000602759 455 ntBASIC4.3□□□□□ -1.72
RTL9Q8NET4 AL139286.1-201ENST00000604465 483 ntBASIC4.3□□□□□ -1.72
RTL9Q8NET4 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.3□□□□□ -1.72
RTL9Q8NET4 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RTL9Q8NET4 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.3□□□□□ -1.72
RTL9Q8NET4 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.3□□□□□ -1.72
RTL9Q8NET4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
RTL9Q8NET4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.3□□□□□ -1.72
RTL9Q8NET4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RTL9Q8NET4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
RTL9Q8NET4 NMD3P1-201ENST00000439704 1488 ntBASIC4.3□□□□□ -1.72
RTL9Q8NET4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RTL9Q8NET4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.29□□□□□ -1.72
RTL9Q8NET4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.29□□□□□ -1.72
RTL9Q8NET4 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RTL9Q8NET4 RSL24D1P1-201ENST00000404972 493 ntBASIC4.29□□□□□ -1.72
RTL9Q8NET4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.29□□□□□ -1.72
RTL9Q8NET4 RAC1P3-201ENST00000416129 580 ntBASIC4.29□□□□□ -1.72
RTL9Q8NET4 HSPE1P27-201ENST00000430808 296 ntBASIC4.29□□□□□ -1.72
RTL9Q8NET4 UBE2V1P1-201ENST00000430836 445 ntBASIC4.29□□□□□ -1.72
RTL9Q8NET4 AC091862.1-201ENST00000438016 1100 ntBASIC4.29□□□□□ -1.72
RTL9Q8NET4 AC127537.2-201ENST00000439258 465 ntBASIC4.29□□□□□ -1.72
RTL9Q8NET4 RPS29P31-201ENST00000446147 164 ntBASIC4.29□□□□□ -1.72
RTL9Q8NET4 AC010307.1-201ENST00000467206 836 ntBASIC4.29□□□□□ -1.72
RTL9Q8NET4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.29□□□□□ -1.72
RTL9Q8NET4 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.29□□□□□ -1.72
RTL9Q8NET4 RPL23AP73-201ENST00000492507 471 ntBASIC4.29□□□□□ -1.72
RTL9Q8NET4 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RTL9Q8NET4 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.29□□□□□ -1.72
RTL9Q8NET4 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.29□□□□□ -1.72
RTL9Q8NET4 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.29□□□□□ -1.72
RTL9Q8NET4 AP002967.1-201ENST00000624203 539 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms