Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.03□□□□□ -1.6
CCDC33Q8N5R6 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC33Q8N5R6 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC33Q8N5R6 AC074029.1-201ENST00000552531 1044 ntBASIC5.03□□□□□ -1.6
CCDC33Q8N5R6 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC33Q8N5R6 AC087477.6-201ENST00000559595 843 ntBASIC5.03□□□□□ -1.6
CCDC33Q8N5R6 AC093249.4-201ENST00000564755 259 ntBASIC5.03□□□□□ -1.6
CCDC33Q8N5R6 AC074051.3-201ENST00000570238 358 ntBASIC5.03□□□□□ -1.6
CCDC33Q8N5R6 CYCSP40-201ENST00000575927 294 ntBASIC5.03□□□□□ -1.6
CCDC33Q8N5R6 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC33Q8N5R6 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC33Q8N5R6 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC33Q8N5R6 AC091946.2-201ENST00000606105 291 ntBASIC5.03□□□□□ -1.6
CCDC33Q8N5R6 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC33Q8N5R6 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC33Q8N5R6 AC009704.2-201ENST00000618739 483 ntBASIC5.03□□□□□ -1.6
CCDC33Q8N5R6 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC33Q8N5R6 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC33Q8N5R6 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC33Q8N5R6 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC33Q8N5R6 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CCDC33Q8N5R6 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
CCDC33Q8N5R6 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC33Q8N5R6 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC33Q8N5R6 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC33Q8N5R6 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 SALL4P2-201ENST00000423288 2910 ntBASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 OR4A15-201ENST00000314706 1035 ntBASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 SNORD116-8-201ENST00000384365 95 ntBASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 MIR298-201ENST00000401212 88 ntBASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 MTND2P18-201ENST00000419962 1030 ntBASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 RGS17P1-201ENST00000423358 553 ntBASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 RPS26P56-201ENST00000444468 240 ntBASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 TPT1P12-201ENST00000448968 492 ntBASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 SLC25A18P1-201ENST00000449385 454 ntBASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 RPL12P26-201ENST00000452430 487 ntBASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 AURKAPS2-201ENST00000454983 333 ntBASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 snoU13.1-201ENST00000459157 104 ntBASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 APOOP2-201ENST00000461561 539 ntBASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 AC112206.1-201ENST00000468416 477 ntBASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 RPL12P20-201ENST00000475538 479 ntBASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 KLRA1P-201ENST00000503499 986 ntBASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 RNA5SP464-201ENST00000516251 108 ntBASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 AC084757.1-201ENST00000559987 490 ntBASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 AC008088.1-201ENST00000580993 280 ntBASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 AC078883.4-201ENST00000623218 367 ntBASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 AC010928.1-201ENST00000592477 1447 ntBASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 SGO1P2-201ENST00000429458 1589 ntBASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 AC008758.3-201ENST00000507003 1829 ntBASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CCDC33Q8N5R6 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC33Q8N5R6 CDR1-202ENST00000625883 1485 ntBASIC5.01□□□□□ -1.61
CCDC33Q8N5R6 A2MP1-204ENST00000566278 4130 ntBASIC5.01□□□□□ -1.61
CCDC33Q8N5R6 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC33Q8N5R6 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC33Q8N5R6 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC33Q8N5R6 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CCDC33Q8N5R6 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC33Q8N5R6 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CCDC33Q8N5R6 Y_RNA.169-201ENST00000363745 96 ntBASIC5.01□□□□□ -1.61
CCDC33Q8N5R6 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC33Q8N5R6 RNU6-921P-201ENST00000384361 107 ntBASIC5.01□□□□□ -1.61
CCDC33Q8N5R6 MIR506-201ENST00000384998 124 ntBASIC5.01□□□□□ -1.61
CCDC33Q8N5R6 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC33Q8N5R6 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC33Q8N5R6 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC33Q8N5R6 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC33Q8N5R6 SETP8-201ENST00000435341 628 ntBASIC5.01□□□□□ -1.61
CCDC33Q8N5R6 AC105402.2-201ENST00000438503 358 ntBASIC5.01□□□□□ -1.61
CCDC33Q8N5R6 HMGB3P9-201ENST00000441799 583 ntBASIC5.01□□□□□ -1.61
CCDC33Q8N5R6 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC33Q8N5R6 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC33Q8N5R6 AC010326.1-201ENST00000462726 602 ntBASIC5.01□□□□□ -1.61
CCDC33Q8N5R6 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.01□□□□□ -1.61
CCDC33Q8N5R6 RN7SL385P-201ENST00000468873 276 ntBASIC5.01□□□□□ -1.61
CCDC33Q8N5R6 SNORD116-26-201ENST00000516006 96 ntBASIC5.01□□□□□ -1.61
CCDC33Q8N5R6 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC33Q8N5R6 CYCSP28-201ENST00000534284 321 ntBASIC5.01□□□□□ -1.61
CCDC33Q8N5R6 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.01□□□□□ -1.61
CCDC33Q8N5R6 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms