Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 KNOP1P3-201ENST00000446933 426 ntBASIC4.88□□□□□ -1.63
KRT78Q8N1N4 AL354714.3-201ENST00000447284 493 ntBASIC4.88□□□□□ -1.63
KRT78Q8N1N4 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.88□□□□□ -1.63
KRT78Q8N1N4 TRGVB-201ENST00000453257 471 ntBASIC4.88□□□□□ -1.63
KRT78Q8N1N4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.88□□□□□ -1.63
KRT78Q8N1N4 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.88□□□□□ -1.63
KRT78Q8N1N4 RN7SL346P-201ENST00000491561 294 ntBASIC4.88□□□□□ -1.63
KRT78Q8N1N4 AC092045.1-201ENST00000495716 1231 ntBASIC4.88□□□□□ -1.63
KRT78Q8N1N4 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.88□□□□□ -1.63
KRT78Q8N1N4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.88□□□□□ -1.63
KRT78Q8N1N4 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.88□□□□□ -1.63
KRT78Q8N1N4 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.88□□□□□ -1.63
KRT78Q8N1N4 RNU6-150P-201ENST00000516237 95 ntBASIC4.88□□□□□ -1.63
KRT78Q8N1N4 RN7SKP234-201ENST00000517173 224 ntBASIC4.88□□□□□ -1.63
KRT78Q8N1N4 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.88□□□□□ -1.63
KRT78Q8N1N4 AC105031.1-201ENST00000518550 476 ntBASIC4.88□□□□□ -1.63
KRT78Q8N1N4 MTCO1P49-201ENST00000523429 802 ntBASIC4.88□□□□□ -1.63
KRT78Q8N1N4 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.88□□□□□ -1.63
KRT78Q8N1N4 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KRT78Q8N1N4 AL356057.1-201ENST00000533798 831 ntBASIC4.88□□□□□ -1.63
KRT78Q8N1N4 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.88□□□□□ -1.63
KRT78Q8N1N4 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.88□□□□□ -1.63
KRT78Q8N1N4 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KRT78Q8N1N4 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.88□□□□□ -1.63
KRT78Q8N1N4 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.88□□□□□ -1.63
KRT78Q8N1N4 CYCSP2-201ENST00000558168 301 ntBASIC4.88□□□□□ -1.63
KRT78Q8N1N4 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.88□□□□□ -1.63
KRT78Q8N1N4 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KRT78Q8N1N4 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.88□□□□□ -1.63
KRT78Q8N1N4 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.88□□□□□ -1.63
KRT78Q8N1N4 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.88□□□□□ -1.63
KRT78Q8N1N4 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.88□□□□□ -1.63
KRT78Q8N1N4 AC025588.3-201ENST00000604182 274 ntBASIC4.88□□□□□ -1.63
KRT78Q8N1N4 AC105129.3-201ENST00000605455 485 ntBASIC4.88□□□□□ -1.63
KRT78Q8N1N4 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.88□□□□□ -1.63
KRT78Q8N1N4 MIR6862-1-201ENST00000613016 70 ntBASIC4.88□□□□□ -1.63
KRT78Q8N1N4 MIR6862-2-201ENST00000614755 70 ntBASIC4.88□□□□□ -1.63
KRT78Q8N1N4 MIR6729-201ENST00000618194 65 ntBASIC4.88□□□□□ -1.63
KRT78Q8N1N4 BX005214.3-202ENST00000619809 325 ntBASIC4.88□□□□□ -1.63
KRT78Q8N1N4 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.88□□□□□ -1.63
KRT78Q8N1N4 AC000123.2-201ENST00000623124 461 ntBASIC4.88□□□□□ -1.63
KRT78Q8N1N4 AC007494.3-201ENST00000624660 743 ntBASIC4.88□□□□□ -1.63
KRT78Q8N1N4 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
KRT78Q8N1N4 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRT78Q8N1N4 GDI2P1-201ENST00000429312 1336 ntBASIC4.88□□□□□ -1.63
KRT78Q8N1N4 ZNF652P1-201ENST00000442420 1309 ntBASIC4.88□□□□□ -1.63
KRT78Q8N1N4 Z95327.2-201ENST00000414579 1873 ntBASIC4.88□□□□□ -1.63
KRT78Q8N1N4 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 LINC00561-201ENST00000565815 2738 ntBASIC4.87□□□□□ -1.63
KRT78Q8N1N4 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 RN7SKP269-201ENST00000365545 319 ntBASIC4.87□□□□□ -1.63
KRT78Q8N1N4 MIR1250-201ENST00000408098 113 ntBASIC4.87□□□□□ -1.63
KRT78Q8N1N4 U3.32-201ENST00000408116 212 ntBASIC4.87□□□□□ -1.63
KRT78Q8N1N4 U3.36-201ENST00000408418 213 ntBASIC4.87□□□□□ -1.63
KRT78Q8N1N4 AC083875.1-201ENST00000419509 405 ntBASIC4.87□□□□□ -1.63
KRT78Q8N1N4 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 AL390023.1-201ENST00000428836 262 ntBASIC4.87□□□□□ -1.63
KRT78Q8N1N4 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.87□□□□□ -1.63
KRT78Q8N1N4 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 TMX2P1-201ENST00000436507 708 ntBASIC4.87□□□□□ -1.63
KRT78Q8N1N4 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 MTND1P29-201ENST00000448112 647 ntBASIC4.87□□□□□ -1.63
KRT78Q8N1N4 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 IGHV5-78-201ENST00000450948 295 ntBASIC4.87□□□□□ -1.63
KRT78Q8N1N4 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 AC026410.2-201ENST00000460281 156 ntBASIC4.87□□□□□ -1.63
KRT78Q8N1N4 PLGLA-201ENST00000465668 449 ntBASIC4.87□□□□□ -1.63
KRT78Q8N1N4 MTND3P7-201ENST00000474435 343 ntBASIC4.87□□□□□ -1.63
KRT78Q8N1N4 RN7SL222P-201ENST00000476452 299 ntBASIC4.87□□□□□ -1.63
KRT78Q8N1N4 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 AC093767.1-201ENST00000504523 156 ntBASIC4.87□□□□□ -1.63
KRT78Q8N1N4 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 Y_RNA.655-201ENST00000515919 96 ntBASIC4.87□□□□□ -1.63
KRT78Q8N1N4 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 IGLV2-28-201ENST00000520681 304 ntBASIC4.87□□□□□ -1.63
KRT78Q8N1N4 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.87□□□□□ -1.63
KRT78Q8N1N4 NMNAT1P1-201ENST00000554095 876 ntBASIC4.87□□□□□ -1.63
KRT78Q8N1N4 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms