Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RPL7L1P13-201ENST00000511702 739 ntBASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 RNA5SP154-201ENST00000516193 111 ntBASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 AC006272.2-201ENST00000594725 163 ntBASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 AC079089.3-201ENST00000603094 673 ntBASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 AL732372.2-225ENST00000642124 456 ntBASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 AL135938.1-201ENST00000443141 297 ntBASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 RPL7P59-201ENST00000447700 943 ntBASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 DNAJC19P8-201ENST00000452887 259 ntBASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 DPRXP4-201ENST00000578053 568 ntBASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 NAP1L1P2-201ENST00000414182 1089 ntBASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 RN7SKP132-201ENST00000516001 208 ntBASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 H3F3AP1-201ENST00000559984 334 ntBASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 SNORA18.3-201ENST00000384122 132 ntBASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 AC004552.1-201ENST00000419089 348 ntBASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 FTLP19-201ENST00000433300 394 ntBASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 AC087312.1-201ENST00000471411 480 ntBASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 OR4A12P-201ENST00000530847 918 ntBASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 AC000123.3-201ENST00000624029 4975 ntBASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
VPS13DQ5THJ4 MIR422A-201ENST00000362286 90 ntBASIC2.21□□□□□ -2.05
VPS13DQ5THJ4 RNA5SP235-201ENST00000365411 114 ntBASIC2.21□□□□□ -2.05
VPS13DQ5THJ4 BMS1P22-201ENST00000414726 313 ntBASIC2.21□□□□□ -2.05
VPS13DQ5THJ4 AC005002.1-201ENST00000447458 540 ntBASIC2.21□□□□□ -2.05
VPS13DQ5THJ4 RPL5P30-201ENST00000465511 891 ntBASIC2.21□□□□□ -2.05
VPS13DQ5THJ4 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC2.21□□□□□ -2.05
VPS13DQ5THJ4 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.21□□□□□ -2.05
VPS13DQ5THJ4 AC245100.7-201ENST00000609678 442 ntBASIC2.21□□□□□ -2.05
VPS13DQ5THJ4 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 AL136360.1-201ENST00000503377 1900 ntBASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 FTLP6-201ENST00000355274 422 ntBASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 AC002075.2-201ENST00000425207 252 ntBASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 HMGB3P22-202ENST00000451823 572 ntBASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 AC099560.2-201ENST00000457554 255 ntBASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 AC087276.1-201ENST00000529659 480 ntBASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 AC022882.1-201ENST00000532142 501 ntBASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 RNU4-44P-201ENST00000363050 141 ntBASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 HDGFP1-201ENST00000405943 252 ntBASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 Y_RNA.673-201ENST00000516306 88 ntBASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 OR5AP1P-201ENST00000529730 940 ntBASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 AL359757.2-201ENST00000624309 274 ntBASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 AL132656.3-201ENST00000606384 1595 ntBASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 SYF2-202ENST00000354361 926 ntTSL 2 BASIC2.21□□□□□ -2.06
VPS13DQ5THJ4 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms