Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 RPL23AP31-201ENST00000456160 467 ntBASIC7.37□□□□□ -1.23
VARS2Q5ST30 AC087385.1-201ENST00000475062 312 ntBASIC7.37□□□□□ -1.23
VARS2Q5ST30 RN7SL568P-201ENST00000493069 298 ntBASIC7.37□□□□□ -1.23
VARS2Q5ST30 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 RNU4-57P-201ENST00000515980 135 ntBASIC7.37□□□□□ -1.23
VARS2Q5ST30 RNA5SP278-201ENST00000517055 102 ntBASIC7.37□□□□□ -1.23
VARS2Q5ST30 AC144568.1-201ENST00000520139 137 ntBASIC7.37□□□□□ -1.23
VARS2Q5ST30 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC7.37□□□□□ -1.23
VARS2Q5ST30 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 AL591926.1-201ENST00000620542 217 ntBASIC7.37□□□□□ -1.23
VARS2Q5ST30 AC025034.2-201ENST00000623264 286 ntBASIC7.37□□□□□ -1.23
VARS2Q5ST30 TEX41-280ENST00000629185 591 ntTSL 5 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 EIF2AP4-201ENST00000424793 1781 ntBASIC7.37□□□□□ -1.23
VARS2Q5ST30 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
VARS2Q5ST30 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
VARS2Q5ST30 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
VARS2Q5ST30 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
VARS2Q5ST30 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
VARS2Q5ST30 AL161756.3-201ENST00000641216 2071 ntBASIC7.37□□□□□ -1.23
VARS2Q5ST30 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
VARS2Q5ST30 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
VARS2Q5ST30 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
VARS2Q5ST30 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
VARS2Q5ST30 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
VARS2Q5ST30 DLEU2L-201ENST00000371086 3555 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
VARS2Q5ST30 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
VARS2Q5ST30 AL161781.1-201ENST00000354277 403 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 MIR625-201ENST00000385047 85 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 AL590762.1-201ENST00000391782 432 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
VARS2Q5ST30 AC026310.1-201ENST00000396004 378 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 RN7SKP296-201ENST00000411185 341 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 BX276092.3-201ENST00000424182 230 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 AC093414.1-201ENST00000434712 514 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 AL121578.2-201ENST00000448797 447 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 SSXP4-201ENST00000451349 245 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 CFL1P4-201ENST00000451536 498 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 RN7SL83P-201ENST00000468131 297 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.36□□□□□ -1.23
VARS2Q5ST30 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC7.36□□□□□ -1.23
VARS2Q5ST30 RN7SL654P-201ENST00000479178 292 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 CYCTP-201ENST00000504253 315 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.36□□□□□ -1.23
VARS2Q5ST30 SCARNA24.2-201ENST00000516968 130 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 AC087752.2-201ENST00000521219 281 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC7.36□□□□□ -1.23
VARS2Q5ST30 AC036111.2-201ENST00000533247 901 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 OR5BK1P-201ENST00000550421 823 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC7.36□□□□□ -1.23
VARS2Q5ST30 AC023827.2-201ENST00000566880 1061 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 MIR4679-2-201ENST00000578358 77 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.36□□□□□ -1.23
VARS2Q5ST30 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
VARS2Q5ST30 AL670379.6-201ENST00000603753 252 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 AC098826.3-201ENST00000603823 466 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 AL499605.1-201ENST00000604628 403 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 AL670379.1-201ENST00000604752 252 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 AL451044.1-201ENST00000604867 238 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 AL670379.2-201ENST00000604983 252 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 AL670379.5-201ENST00000605253 252 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 AL670379.8-201ENST00000605353 252 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 AL670379.7-201ENST00000605823 252 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC7.36□□□□□ -1.23
VARS2Q5ST30 AL591926.4-201ENST00000616895 298 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 MIR6823-201ENST00000622118 61 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
VARS2Q5ST30 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
VARS2Q5ST30 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
VARS2Q5ST30 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
VARS2Q5ST30 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
VARS2Q5ST30 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.36□□□□□ -1.23
VARS2Q5ST30 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
VARS2Q5ST30 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
VARS2Q5ST30 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.36□□□□□ -1.23
VARS2Q5ST30 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
VARS2Q5ST30 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.36□□□□□ -1.23
VARS2Q5ST30 OR2AH1P-202ENST00000641232 2744 ntBASIC7.36□□□□□ -1.23
VARS2Q5ST30 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
VARS2Q5ST30 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
VARS2Q5ST30 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
VARS2Q5ST30 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
VARS2Q5ST30 THAP12P4-201ENST00000528321 2266 ntBASIC7.35□□□□□ -1.23
VARS2Q5ST30 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
VARS2Q5ST30 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
VARS2Q5ST30 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms