Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 MTCO2P32-201ENST00000514865 403 ntBASIC3.31□□□□□ -1.88
USF2Q15853 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.31□□□□□ -1.88
USF2Q15853 HMGB1P23-201ENST00000518743 568 ntBASIC3.31□□□□□ -1.88
USF2Q15853 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.31□□□□□ -1.88
USF2Q15853 AP001207.1-201ENST00000524051 481 ntBASIC3.31□□□□□ -1.88
USF2Q15853 AP004371.1-201ENST00000525240 214 ntBASIC3.31□□□□□ -1.88
USF2Q15853 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.31□□□□□ -1.88
USF2Q15853 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.31□□□□□ -1.88
USF2Q15853 AC006064.5-201ENST00000541782 248 ntBASIC3.31□□□□□ -1.88
USF2Q15853 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.31□□□□□ -1.88
USF2Q15853 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.31□□□□□ -1.88
USF2Q15853 AC137768.1-201ENST00000549998 553 ntBASIC3.31□□□□□ -1.88
USF2Q15853 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.31□□□□□ -1.88
USF2Q15853 AL109766.1-201ENST00000555080 552 ntBASIC3.31□□□□□ -1.88
USF2Q15853 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.31□□□□□ -1.88
USF2Q15853 AC005229.3-201ENST00000603438 323 ntBASIC3.31□□□□□ -1.88
USF2Q15853 AL009028.1-201ENST00000604895 802 ntBASIC3.31□□□□□ -1.88
USF2Q15853 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.31□□□□□ -1.88
USF2Q15853 AL592295.2-201ENST00000612578 206 ntBASIC3.31□□□□□ -1.88
USF2Q15853 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
USF2Q15853 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
USF2Q15853 AC092628.2-201ENST00000622492 339 ntBASIC3.31□□□□□ -1.88
USF2Q15853 AC008785.1-201ENST00000624475 456 ntBASIC3.31□□□□□ -1.88
USF2Q15853 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.31□□□□□ -1.88
USF2Q15853 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
USF2Q15853 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.31□□□□□ -1.88
USF2Q15853 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
USF2Q15853 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.31□□□□□ -1.88
USF2Q15853 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
USF2Q15853 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
USF2Q15853 AF117829.1-206ENST00000621883 3802 ntBASIC3.31□□□□□ -1.88
USF2Q15853 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
USF2Q15853 ZNF826P-207ENST00000622273 1910 ntBASIC3.31□□□□□ -1.88
USF2Q15853 NSRP1P1-201ENST00000444067 1693 ntBASIC3.3□□□□□ -1.88
USF2Q15853 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.3□□□□□ -1.88
USF2Q15853 AL137100.1-201ENST00000556703 1620 ntBASIC3.3□□□□□ -1.88
USF2Q15853 OR56B2P-202ENST00000641377 2453 ntBASIC3.3□□□□□ -1.88
USF2Q15853 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
USF2Q15853 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
USF2Q15853 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
USF2Q15853 OR5P1P-201ENST00000299512 925 ntBASIC3.3□□□□□ -1.88
USF2Q15853 AC079741.1-201ENST00000321498 212 ntBASIC3.3□□□□□ -1.88
USF2Q15853 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.3□□□□□ -1.88
USF2Q15853 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
USF2Q15853 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
USF2Q15853 AL583835.1-201ENST00000399570 407 ntBASIC3.3□□□□□ -1.88
USF2Q15853 SNORA3C-201ENST00000408792 125 ntBASIC3.3□□□□□ -1.88
USF2Q15853 RNA5SP129-201ENST00000410276 118 ntBASIC3.3□□□□□ -1.88
USF2Q15853 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.3□□□□□ -1.88
USF2Q15853 AC069213.2-201ENST00000420238 366 ntBASIC3.3□□□□□ -1.88
USF2Q15853 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.3□□□□□ -1.88
USF2Q15853 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.3□□□□□ -1.88
USF2Q15853 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.3□□□□□ -1.88
USF2Q15853 H2AFZP6-201ENST00000444403 394 ntBASIC3.3□□□□□ -1.88
USF2Q15853 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.3□□□□□ -1.88
USF2Q15853 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.3□□□□□ -1.88
USF2Q15853 AC010307.1-201ENST00000467206 836 ntBASIC3.3□□□□□ -1.88
USF2Q15853 TRBV8-2-201ENST00000475637 270 ntBASIC3.3□□□□□ -1.88
USF2Q15853 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.3□□□□□ -1.88
USF2Q15853 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.3□□□□□ -1.88
USF2Q15853 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.3□□□□□ -1.88
USF2Q15853 AC108064.1-201ENST00000513791 460 ntBASIC3.3□□□□□ -1.88
USF2Q15853 IGLVIV-65-201ENST00000517313 360 ntBASIC3.3□□□□□ -1.88
USF2Q15853 IGHV3-76-201ENST00000522465 295 ntBASIC3.3□□□□□ -1.88
USF2Q15853 AC109635.4-202ENST00000531666 412 ntBASIC3.3□□□□□ -1.88
USF2Q15853 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.3□□□□□ -1.88
USF2Q15853 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.3□□□□□ -1.88
USF2Q15853 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.3□□□□□ -1.88
USF2Q15853 OR4T1P-201ENST00000554933 911 ntBASIC3.3□□□□□ -1.88
USF2Q15853 EIF1AXP2-201ENST00000555940 413 ntBASIC3.3□□□□□ -1.88
USF2Q15853 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.3□□□□□ -1.88
USF2Q15853 AC027176.2-201ENST00000559166 746 ntBASIC3.3□□□□□ -1.88
USF2Q15853 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.3□□□□□ -1.88
USF2Q15853 MIR4474-201ENST00000579189 78 ntBASIC3.3□□□□□ -1.88
USF2Q15853 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.3□□□□□ -1.88
USF2Q15853 IGHV3-29-201ENST00000604817 344 ntBASIC3.3□□□□□ -1.88
USF2Q15853 AP003392.5-201ENST00000607857 415 ntBASIC3.3□□□□□ -1.88
USF2Q15853 uc_338.13-201ENST00000618243 179 ntBASIC3.3□□□□□ -1.88
USF2Q15853 MIR7702-201ENST00000621931 59 ntBASIC3.3□□□□□ -1.88
USF2Q15853 AC138907.10-201ENST00000623708 983 ntBASIC3.3□□□□□ -1.88
USF2Q15853 MIR7153-201ENST00000637758 57 ntBASIC3.3□□□□□ -1.88
USF2Q15853 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
USF2Q15853 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
USF2Q15853 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
USF2Q15853 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
USF2Q15853 AC011978.2-201ENST00000569835 2054 ntBASIC3.29□□□□□ -1.88
USF2Q15853 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.29□□□□□ -1.88
USF2Q15853 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
USF2Q15853 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
USF2Q15853 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
USF2Q15853 AC005183.1-201ENST00000603687 1979 ntBASIC3.29□□□□□ -1.88
USF2Q15853 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
USF2Q15853 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
USF2Q15853 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
USF2Q15853 RNVU1-6-201ENST00000364688 164 ntBASIC3.29□□□□□ -1.88
USF2Q15853 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
USF2Q15853 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
USF2Q15853 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
USF2Q15853 RNU6-629P-201ENST00000384061 103 ntBASIC3.29□□□□□ -1.88
USF2Q15853 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms