Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
CACNA1SQ13698 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.23□□□□□ -1.73
CACNA1SQ13698 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.23□□□□□ -1.73
CACNA1SQ13698 AC118273.1-201ENST00000525324 3006 ntBASIC4.23□□□□□ -1.73
CACNA1SQ13698 HSPA8P19-201ENST00000505359 1517 ntBASIC4.23□□□□□ -1.73
CACNA1SQ13698 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CACNA1SQ13698 CCRL1P1-201ENST00000449542 1053 ntBASIC4.23□□□□□ -1.73
CACNA1SQ13698 AC020893.1-201ENST00000502452 580 ntBASIC4.23□□□□□ -1.73
CACNA1SQ13698 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.23□□□□□ -1.73
CACNA1SQ13698 OR1AB1P-201ENST00000585564 761 ntBASIC4.23□□□□□ -1.73
CACNA1SQ13698 AL137072.1-201ENST00000603444 466 ntBASIC4.23□□□□□ -1.73
CACNA1SQ13698 AP001005.3-201ENST00000622049 129 ntBASIC4.23□□□□□ -1.73
CACNA1SQ13698 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.23□□□□□ -1.73
CACNA1SQ13698 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CACNA1SQ13698 OTUD4P1-201ENST00000237841 3067 ntBASIC4.22□□□□□ -1.73
CACNA1SQ13698 GSTA8P-201ENST00000404253 637 ntBASIC4.22□□□□□ -1.73
CACNA1SQ13698 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.22□□□□□ -1.73
CACNA1SQ13698 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.22□□□□□ -1.73
CACNA1SQ13698 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.22□□□□□ -1.73
CACNA1SQ13698 RPS3AP50-201ENST00000487064 803 ntBASIC4.22□□□□□ -1.73
CACNA1SQ13698 RFPL4AP5-201ENST00000514977 504 ntBASIC4.22□□□□□ -1.73
CACNA1SQ13698 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.22□□□□□ -1.73
CACNA1SQ13698 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.22□□□□□ -1.73
CACNA1SQ13698 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.22□□□□□ -1.73
CACNA1SQ13698 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.22□□□□□ -1.73
CACNA1SQ13698 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.22□□□□□ -1.73
CACNA1SQ13698 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.22□□□□□ -1.73
CACNA1SQ13698 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.22□□□□□ -1.73
CACNA1SQ13698 AC009464.1-201ENST00000615731 469 ntBASIC4.22□□□□□ -1.73
CACNA1SQ13698 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.22□□□□□ -1.73
CACNA1SQ13698 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.22□□□□□ -1.73
CACNA1SQ13698 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CACNA1SQ13698 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.22□□□□□ -1.73
CACNA1SQ13698 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.22□□□□□ -1.73
CACNA1SQ13698 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CACNA1SQ13698 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CACNA1SQ13698 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CACNA1SQ13698 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.22□□□□□ -1.73
CACNA1SQ13698 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.22□□□□□ -1.73
CACNA1SQ13698 HMGN2P8-201ENST00000391458 268 ntBASIC4.22□□□□□ -1.73
CACNA1SQ13698 RSL24D1P1-201ENST00000404972 493 ntBASIC4.22□□□□□ -1.73
CACNA1SQ13698 USP9YP36-201ENST00000424581 829 ntBASIC4.22□□□□□ -1.73
CACNA1SQ13698 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.22□□□□□ -1.73
CACNA1SQ13698 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.22□□□□□ -1.73
CACNA1SQ13698 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.22□□□□□ -1.73
CACNA1SQ13698 USP9YP31-201ENST00000431405 881 ntBASIC4.22□□□□□ -1.73
CACNA1SQ13698 NPM1P39-201ENST00000449818 867 ntBASIC4.22□□□□□ -1.73
CACNA1SQ13698 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.22□□□□□ -1.73
CACNA1SQ13698 HMGB3P13-201ENST00000511263 607 ntBASIC4.22□□□□□ -1.73
CACNA1SQ13698 MIR4513-201ENST00000581077 86 ntBASIC4.22□□□□□ -1.73
CACNA1SQ13698 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CACNA1SQ13698 AC073073.2-201ENST00000609827 2578 ntBASIC4.22□□□□□ -1.73
CACNA1SQ13698 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CACNA1SQ13698 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.21□□□□□ -1.74
CACNA1SQ13698 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CACNA1SQ13698 RNA5SP322-201ENST00000363617 119 ntBASIC4.21□□□□□ -1.74
CACNA1SQ13698 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CACNA1SQ13698 UBE2V1P2-201ENST00000397758 440 ntBASIC4.21□□□□□ -1.74
CACNA1SQ13698 AL121834.1-202ENST00000404494 277 ntBASIC4.21□□□□□ -1.74
CACNA1SQ13698 RN7SKP247-201ENST00000411094 308 ntBASIC4.21□□□□□ -1.74
CACNA1SQ13698 VN1R51P-201ENST00000411675 945 ntBASIC4.21□□□□□ -1.74
CACNA1SQ13698 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
CACNA1SQ13698 AC093698.1-201ENST00000423843 571 ntBASIC4.21□□□□□ -1.74
CACNA1SQ13698 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.21□□□□□ -1.74
CACNA1SQ13698 RPL7P48-201ENST00000461513 746 ntBASIC4.21□□□□□ -1.74
CACNA1SQ13698 RN7SL863P-201ENST00000462370 296 ntBASIC4.21□□□□□ -1.74
CACNA1SQ13698 AC011825.1-201ENST00000484967 388 ntBASIC4.21□□□□□ -1.74
CACNA1SQ13698 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.21□□□□□ -1.74
CACNA1SQ13698 AC026801.2-201ENST00000515352 425 ntBASIC4.21□□□□□ -1.74
CACNA1SQ13698 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CACNA1SQ13698 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CACNA1SQ13698 LARP7P3-201ENST00000579888 337 ntBASIC4.21□□□□□ -1.74
CACNA1SQ13698 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.21□□□□□ -1.74
CACNA1SQ13698 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CACNA1SQ13698 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CACNA1SQ13698 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.21□□□□□ -1.74
CACNA1SQ13698 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.21□□□□□ -1.74
CACNA1SQ13698 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CACNA1SQ13698 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CACNA1SQ13698 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.2□□□□□ -1.74
CACNA1SQ13698 RNU1-70P-201ENST00000362618 164 ntBASIC4.2□□□□□ -1.74
CACNA1SQ13698 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CACNA1SQ13698 HSPE1P8-201ENST00000406997 288 ntBASIC4.2□□□□□ -1.74
CACNA1SQ13698 SETP10-201ENST00000424368 814 ntBASIC4.2□□□□□ -1.74
CACNA1SQ13698 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CACNA1SQ13698 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.2□□□□□ -1.74
CACNA1SQ13698 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.2□□□□□ -1.74
CACNA1SQ13698 RN7SL93P-201ENST00000463035 293 ntBASIC4.2□□□□□ -1.74
CACNA1SQ13698 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.2□□□□□ -1.74
CACNA1SQ13698 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.2□□□□□ -1.74
CACNA1SQ13698 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.2□□□□□ -1.74
CACNA1SQ13698 BRDTP1-201ENST00000605735 677 ntBASIC4.2□□□□□ -1.74
CACNA1SQ13698 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.2□□□□□ -1.74
CACNA1SQ13698 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.2□□□□□ -1.74
CACNA1SQ13698 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CACNA1SQ13698 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CACNA1SQ13698 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CACNA1SQ13698 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.2□□□□□ -1.74
CACNA1SQ13698 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CACNA1SQ13698 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms