Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.41□□□□□ -1.7
GABPAQ06546 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.41□□□□□ -1.7
GABPAQ06546 AC026726.1-201ENST00000512859 601 ntBASIC4.41□□□□□ -1.7
GABPAQ06546 SNORA76.2-201ENST00000517095 137 ntBASIC4.41□□□□□ -1.7
GABPAQ06546 AF186190.1-201ENST00000517470 480 ntBASIC4.41□□□□□ -1.7
GABPAQ06546 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.41□□□□□ -1.7
GABPAQ06546 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.41□□□□□ -1.7
GABPAQ06546 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
GABPAQ06546 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.41□□□□□ -1.7
GABPAQ06546 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.41□□□□□ -1.7
GABPAQ06546 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.41□□□□□ -1.7
GABPAQ06546 AC020914.6-201ENST00000594327 272 ntBASIC4.41□□□□□ -1.7
GABPAQ06546 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.41□□□□□ -1.7
GABPAQ06546 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.41□□□□□ -1.7
GABPAQ06546 AC069200.1-201ENST00000609511 323 ntBASIC4.41□□□□□ -1.7
GABPAQ06546 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
GABPAQ06546 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
GABPAQ06546 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.41□□□□□ -1.7
GABPAQ06546 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
GABPAQ06546 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
GABPAQ06546 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
GABPAQ06546 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
GABPAQ06546 AL512283.1-201ENST00000606756 1384 ntBASIC4.4□□□□□ -1.7
GABPAQ06546 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
GABPAQ06546 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
GABPAQ06546 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
GABPAQ06546 SNORA70.4-201ENST00000365509 134 ntBASIC4.4□□□□□ -1.71
GABPAQ06546 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
GABPAQ06546 AC019155.1-201ENST00000382242 574 ntBASIC4.4□□□□□ -1.71
GABPAQ06546 SNORA40.4-201ENST00000390971 128 ntBASIC4.4□□□□□ -1.71
GABPAQ06546 HMGB1P10-201ENST00000395823 563 ntBASIC4.4□□□□□ -1.71
GABPAQ06546 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.4□□□□□ -1.71
GABPAQ06546 NCSTNP1-201ENST00000406229 144 ntBASIC4.4□□□□□ -1.71
GABPAQ06546 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.4□□□□□ -1.71
GABPAQ06546 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
GABPAQ06546 RNU2-17P-201ENST00000410290 190 ntBASIC4.4□□□□□ -1.71
GABPAQ06546 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.4□□□□□ -1.71
GABPAQ06546 MTCO3P4-201ENST00000419236 787 ntBASIC4.4□□□□□ -1.71
GABPAQ06546 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.4□□□□□ -1.71
GABPAQ06546 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.4□□□□□ -1.71
GABPAQ06546 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.4□□□□□ -1.71
GABPAQ06546 YME1L1P1-201ENST00000429435 297 ntBASIC4.4□□□□□ -1.71
GABPAQ06546 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.4□□□□□ -1.71
GABPAQ06546 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.4□□□□□ -1.71
GABPAQ06546 AC096638.2-201ENST00000434965 711 ntBASIC4.4□□□□□ -1.71
GABPAQ06546 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.4□□□□□ -1.71
GABPAQ06546 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.4□□□□□ -1.71
GABPAQ06546 NPM1P17-201ENST00000479221 602 ntBASIC4.4□□□□□ -1.71
GABPAQ06546 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.4□□□□□ -1.71
GABPAQ06546 AC008628.1-201ENST00000508663 265 ntBASIC4.4□□□□□ -1.71
GABPAQ06546 RNU6-347P-201ENST00000516658 105 ntBASIC4.4□□□□□ -1.71
GABPAQ06546 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.4□□□□□ -1.71
GABPAQ06546 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.4□□□□□ -1.71
GABPAQ06546 IGKV2D-19-201ENST00000523346 262 ntBASIC4.4□□□□□ -1.71
GABPAQ06546 AP003049.1-201ENST00000529418 457 ntBASIC4.4□□□□□ -1.71
GABPAQ06546 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
GABPAQ06546 AL136520.1-202ENST00000555494 763 ntBASIC4.4□□□□□ -1.71
GABPAQ06546 AC068714.1-201ENST00000559623 800 ntBASIC4.4□□□□□ -1.71
GABPAQ06546 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.4□□□□□ -1.71
GABPAQ06546 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.4□□□□□ -1.71
GABPAQ06546 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.4□□□□□ -1.71
GABPAQ06546 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.4□□□□□ -1.71
GABPAQ06546 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.4□□□□□ -1.71
GABPAQ06546 AC009237.17-201ENST00000618111 748 ntBASIC4.4□□□□□ -1.71
GABPAQ06546 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.4□□□□□ -1.71
GABPAQ06546 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.4□□□□□ -1.71
GABPAQ06546 FRG1DP-201ENST00000635586 771 ntBASIC4.4□□□□□ -1.71
GABPAQ06546 AC093535.2-201ENST00000624769 2326 ntBASIC4.4□□□□□ -1.71
GABPAQ06546 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
GABPAQ06546 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
GABPAQ06546 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.4□□□□□ -1.71
GABPAQ06546 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
GABPAQ06546 BX005019.1-201ENST00000561881 1810 ntBASIC4.39□□□□□ -1.71
GABPAQ06546 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
GABPAQ06546 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
GABPAQ06546 SNORA63.1-201ENST00000362493 131 ntBASIC4.39□□□□□ -1.71
GABPAQ06546 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
GABPAQ06546 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.39□□□□□ -1.71
GABPAQ06546 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.39□□□□□ -1.71
GABPAQ06546 AC006946.1-201ENST00000429106 328 ntBASIC4.39□□□□□ -1.71
GABPAQ06546 HMGN2P31-201ENST00000432430 273 ntBASIC4.39□□□□□ -1.71
GABPAQ06546 AL035458.1-201ENST00000433096 585 ntBASIC4.39□□□□□ -1.71
GABPAQ06546 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.39□□□□□ -1.71
GABPAQ06546 AC006480.1-201ENST00000449887 378 ntBASIC4.39□□□□□ -1.71
GABPAQ06546 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.39□□□□□ -1.71
GABPAQ06546 METTL15P1-201ENST00000481421 1045 ntBASIC4.39□□□□□ -1.71
GABPAQ06546 UBA52P3-201ENST00000491303 382 ntBASIC4.39□□□□□ -1.71
GABPAQ06546 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.39□□□□□ -1.71
GABPAQ06546 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.39□□□□□ -1.71
GABPAQ06546 VTA1P2-201ENST00000520205 911 ntBASIC4.39□□□□□ -1.71
GABPAQ06546 OR7E13P-201ENST00000526052 910 ntBASIC4.39□□□□□ -1.71
GABPAQ06546 PDCD5P1-201ENST00000543528 309 ntBASIC4.39□□□□□ -1.71
GABPAQ06546 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.39□□□□□ -1.71
GABPAQ06546 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.39□□□□□ -1.71
GABPAQ06546 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.39□□□□□ -1.71
GABPAQ06546 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.39□□□□□ -1.71
GABPAQ06546 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.39□□□□□ -1.71
GABPAQ06546 AC055764.2-201ENST00000610089 670 ntBASIC4.39□□□□□ -1.71
GABPAQ06546 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.39□□□□□ -1.71
GABPAQ06546 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms