Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 YY1P1-201ENST00000427625 668 ntBASIC3.31□□□□□ -1.88
LSM6P62312 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.31□□□□□ -1.88
LSM6P62312 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.31□□□□□ -1.88
LSM6P62312 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.31□□□□□ -1.88
LSM6P62312 NANOGP10-201ENST00000453325 895 ntBASIC3.31□□□□□ -1.88
LSM6P62312 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.31□□□□□ -1.88
LSM6P62312 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.31□□□□□ -1.88
LSM6P62312 RPL5P13-201ENST00000462840 709 ntBASIC3.31□□□□□ -1.88
LSM6P62312 RN7SL323P-201ENST00000494712 295 ntBASIC3.31□□□□□ -1.88
LSM6P62312 AC078918.1-201ENST00000498515 228 ntBASIC3.31□□□□□ -1.88
LSM6P62312 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.31□□□□□ -1.88
LSM6P62312 RN7SKP83-201ENST00000516512 178 ntBASIC3.31□□□□□ -1.88
LSM6P62312 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.31□□□□□ -1.88
LSM6P62312 AL121766.1-201ENST00000547436 487 ntBASIC3.31□□□□□ -1.88
LSM6P62312 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.31□□□□□ -1.88
LSM6P62312 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.31□□□□□ -1.88
LSM6P62312 AGGF1P6-201ENST00000569213 976 ntBASIC3.31□□□□□ -1.88
LSM6P62312 MIR4286-201ENST00000580651 93 ntBASIC3.31□□□□□ -1.88
LSM6P62312 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.31□□□□□ -1.88
LSM6P62312 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.31□□□□□ -1.88
LSM6P62312 ZYXP1-201ENST00000617638 118 ntBASIC3.31□□□□□ -1.88
LSM6P62312 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
LSM6P62312 XIST_intron.1-201ENST00000619444 68 ntBASIC3.31□□□□□ -1.88
LSM6P62312 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
LSM6P62312 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
LSM6P62312 AC091152.2-201ENST00000591628 2569 ntBASIC3.31□□□□□ -1.88
LSM6P62312 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.31□□□□□ -1.88
LSM6P62312 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
LSM6P62312 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.3□□□□□ -1.88
LSM6P62312 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
LSM6P62312 AL353743.4-201ENST00000422653 1547 ntBASIC3.3□□□□□ -1.88
LSM6P62312 AC138915.3-201ENST00000562908 1389 ntBASIC3.3□□□□□ -1.88
LSM6P62312 RNA5SP283-201ENST00000365604 119 ntBASIC3.3□□□□□ -1.88
LSM6P62312 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
LSM6P62312 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
LSM6P62312 RNU6-628P-201ENST00000410675 107 ntBASIC3.3□□□□□ -1.88
LSM6P62312 AC069218.2-201ENST00000411665 344 ntBASIC3.3□□□□□ -1.88
LSM6P62312 BTF3P9-201ENST00000418784 283 ntBASIC3.3□□□□□ -1.88
LSM6P62312 TCEA1P2-201ENST00000420496 906 ntBASIC3.3□□□□□ -1.88
LSM6P62312 AC008065.1-201ENST00000428525 348 ntBASIC3.3□□□□□ -1.88
LSM6P62312 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.3□□□□□ -1.88
LSM6P62312 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.3□□□□□ -1.88
LSM6P62312 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.3□□□□□ -1.88
LSM6P62312 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.3□□□□□ -1.88
LSM6P62312 AC099563.1-201ENST00000456086 418 ntBASIC3.3□□□□□ -1.88
LSM6P62312 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.3□□□□□ -1.88
LSM6P62312 AC004801.2-202ENST00000463559 283 ntBASIC3.3□□□□□ -1.88
LSM6P62312 RPL23AP14-201ENST00000468281 468 ntBASIC3.3□□□□□ -1.88
LSM6P62312 AC146507.1-201ENST00000468335 354 ntBASIC3.3□□□□□ -1.88
LSM6P62312 AL139099.1-201ENST00000497398 403 ntBASIC3.3□□□□□ -1.88
LSM6P62312 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.3□□□□□ -1.88
LSM6P62312 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.3□□□□□ -1.88
LSM6P62312 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.3□□□□□ -1.88
LSM6P62312 RNA5SP208-201ENST00000516156 78 ntBASIC3.3□□□□□ -1.88
LSM6P62312 SOD1P3-201ENST00000518682 454 ntBASIC3.3□□□□□ -1.88
LSM6P62312 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.3□□□□□ -1.88
LSM6P62312 AC022695.1-201ENST00000522089 237 ntBASIC3.3□□□□□ -1.88
LSM6P62312 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.3□□□□□ -1.88
LSM6P62312 HIGD1AP10-201ENST00000527837 282 ntBASIC3.3□□□□□ -1.88
LSM6P62312 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LSM6P62312 OR5D17P-201ENST00000531492 978 ntBASIC3.3□□□□□ -1.88
LSM6P62312 OR8R1P-201ENST00000543943 764 ntBASIC3.3□□□□□ -1.88
LSM6P62312 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.3□□□□□ -1.88
LSM6P62312 AC007224.1-201ENST00000564410 144 ntBASIC3.3□□□□□ -1.88
LSM6P62312 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.3□□□□□ -1.88
LSM6P62312 AC053481.4-201ENST00000583164 216 ntBASIC3.3□□□□□ -1.88
LSM6P62312 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LSM6P62312 AC121761.2-201ENST00000617300 689 ntBASIC3.3□□□□□ -1.88
LSM6P62312 AC079684.1-201ENST00000621405 437 ntBASIC3.3□□□□□ -1.88
LSM6P62312 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.3□□□□□ -1.88
LSM6P62312 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.3□□□□□ -1.88
LSM6P62312 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LSM6P62312 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LSM6P62312 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.3□□□□□ -1.88
LSM6P62312 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
LSM6P62312 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LSM6P62312 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LSM6P62312 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LSM6P62312 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LSM6P62312 RIOK3P1-201ENST00000418778 1528 ntBASIC3.29□□□□□ -1.88
LSM6P62312 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LSM6P62312 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LSM6P62312 AC024560.2-201ENST00000507981 1497 ntBASIC3.29□□□□□ -1.88
LSM6P62312 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LSM6P62312 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.29□□□□□ -1.88
LSM6P62312 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.29□□□□□ -1.88
LSM6P62312 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LSM6P62312 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LSM6P62312 RNU6-618P-201ENST00000363518 112 ntBASIC3.29□□□□□ -1.88
LSM6P62312 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.29□□□□□ -1.88
LSM6P62312 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.29□□□□□ -1.88
LSM6P62312 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.29□□□□□ -1.88
LSM6P62312 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.29□□□□□ -1.88
LSM6P62312 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.29□□□□□ -1.88
LSM6P62312 SETP5-201ENST00000437270 562 ntBASIC3.29□□□□□ -1.88
LSM6P62312 SKP1P1-201ENST00000438081 489 ntBASIC3.29□□□□□ -1.88
LSM6P62312 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.29□□□□□ -1.88
LSM6P62312 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LSM6P62312 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.29□□□□□ -1.88
LSM6P62312 RPL31P20-201ENST00000449593 360 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms