Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC3.14□□□□□ -1.91
SPCS3P61009 AC146507.1-201ENST00000468335 354 ntBASIC3.14□□□□□ -1.91
SPCS3P61009 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SPCS3P61009 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.14□□□□□ -1.91
SPCS3P61009 AC013356.1-201ENST00000489027 564 ntBASIC3.14□□□□□ -1.91
SPCS3P61009 RPS27AP13-201ENST00000498403 237 ntBASIC3.14□□□□□ -1.91
SPCS3P61009 POU5F1P7-201ENST00000508759 541 ntBASIC3.14□□□□□ -1.91
SPCS3P61009 AC034244.2-201ENST00000514668 858 ntBASIC3.14□□□□□ -1.91
SPCS3P61009 RN7SKP209-201ENST00000516888 304 ntBASIC3.14□□□□□ -1.91
SPCS3P61009 SEC11B-201ENST00000518383 499 ntBASIC3.14□□□□□ -1.91
SPCS3P61009 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.14□□□□□ -1.91
SPCS3P61009 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC3.14□□□□□ -1.91
SPCS3P61009 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SPCS3P61009 OR4A12P-201ENST00000530847 918 ntBASIC3.14□□□□□ -1.91
SPCS3P61009 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.14□□□□□ -1.91
SPCS3P61009 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.14□□□□□ -1.91
SPCS3P61009 AC006518.1-201ENST00000541449 943 ntBASIC3.14□□□□□ -1.91
SPCS3P61009 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.14□□□□□ -1.91
SPCS3P61009 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.14□□□□□ -1.91
SPCS3P61009 AL121576.1-201ENST00000556055 276 ntBASIC3.14□□□□□ -1.91
SPCS3P61009 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.14□□□□□ -1.91
SPCS3P61009 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.14□□□□□ -1.91
SPCS3P61009 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.14□□□□□ -1.91
SPCS3P61009 AC006116.5-201ENST00000591936 559 ntBASIC3.14□□□□□ -1.91
SPCS3P61009 AL390816.3-201ENST00000604527 1066 ntBASIC3.14□□□□□ -1.91
SPCS3P61009 AL356218.2-201ENST00000605264 187 ntBASIC3.14□□□□□ -1.91
SPCS3P61009 AC107294.3-201ENST00000609211 526 ntBASIC3.14□□□□□ -1.91
SPCS3P61009 MIR6868-201ENST00000611215 58 ntBASIC3.14□□□□□ -1.91
SPCS3P61009 MIR8059-201ENST00000620427 81 ntBASIC3.14□□□□□ -1.91
SPCS3P61009 AC007342.8-201ENST00000623278 678 ntBASIC3.14□□□□□ -1.91
SPCS3P61009 AC015726.3-201ENST00000624501 418 ntBASIC3.14□□□□□ -1.91
SPCS3P61009 AC019080.5-201ENST00000624891 757 ntBASIC3.14□□□□□ -1.91
SPCS3P61009 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.14□□□□□ -1.91
SPCS3P61009 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.14□□□□□ -1.91
SPCS3P61009 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SPCS3P61009 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SPCS3P61009 MTND5P3-201ENST00000438536 1800 ntBASIC3.14□□□□□ -1.91
SPCS3P61009 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.14□□□□□ -1.91
SPCS3P61009 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.14□□□□□ -1.91
SPCS3P61009 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SPCS3P61009 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SPCS3P61009 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SPCS3P61009 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SPCS3P61009 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.13□□□□□ -1.91
SPCS3P61009 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.13□□□□□ -1.91
SPCS3P61009 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SPCS3P61009 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SPCS3P61009 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.13□□□□□ -1.91
SPCS3P61009 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.13□□□□□ -1.91
SPCS3P61009 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.13□□□□□ -1.91
SPCS3P61009 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SPCS3P61009 RNU6-618P-201ENST00000363518 112 ntBASIC3.13□□□□□ -1.91
SPCS3P61009 RNA5SP509-201ENST00000364577 119 ntBASIC3.13□□□□□ -1.91
SPCS3P61009 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SPCS3P61009 RNU11-4P-201ENST00000391149 133 ntBASIC3.13□□□□□ -1.91
SPCS3P61009 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.13□□□□□ -1.91
SPCS3P61009 TPT1P2-201ENST00000413105 503 ntBASIC3.13□□□□□ -1.91
SPCS3P61009 NDUFB4P5-201ENST00000415445 361 ntBASIC3.13□□□□□ -1.91
SPCS3P61009 BTF3P9-201ENST00000418784 283 ntBASIC3.13□□□□□ -1.91
SPCS3P61009 RPL23AP38-201ENST00000423801 469 ntBASIC3.13□□□□□ -1.91
SPCS3P61009 HMGB1P45-201ENST00000435986 653 ntBASIC3.13□□□□□ -1.91
SPCS3P61009 SKP1P1-201ENST00000438081 489 ntBASIC3.13□□□□□ -1.91
SPCS3P61009 MTND2P8-201ENST00000450555 1025 ntBASIC3.13□□□□□ -1.91
SPCS3P61009 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.13□□□□□ -1.91
SPCS3P61009 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SPCS3P61009 RPL21P11-201ENST00000461458 483 ntBASIC3.13□□□□□ -1.91
SPCS3P61009 RN7SL610P-201ENST00000463845 291 ntBASIC3.13□□□□□ -1.91
SPCS3P61009 RPL37P6-202ENST00000464216 403 ntBASIC3.13□□□□□ -1.91
SPCS3P61009 AC011276.1-201ENST00000469688 323 ntBASIC3.13□□□□□ -1.91
SPCS3P61009 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.13□□□□□ -1.91
SPCS3P61009 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.13□□□□□ -1.91
SPCS3P61009 ACTR6P1-201ENST00000514311 1104 ntBASIC3.13□□□□□ -1.91
SPCS3P61009 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.13□□□□□ -1.91
SPCS3P61009 RN7SKP289-201ENST00000517244 295 ntBASIC3.13□□□□□ -1.91
SPCS3P61009 HIGD1AP18-201ENST00000520730 278 ntBASIC3.13□□□□□ -1.91
SPCS3P61009 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SPCS3P61009 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.13□□□□□ -1.91
SPCS3P61009 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.13□□□□□ -1.91
SPCS3P61009 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SPCS3P61009 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.13□□□□□ -1.91
SPCS3P61009 IPO5P1-202ENST00000600039 287 ntBASIC3.13□□□□□ -1.91
SPCS3P61009 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.13□□□□□ -1.91
SPCS3P61009 MIR7703-201ENST00000620784 77 ntBASIC3.13□□□□□ -1.91
SPCS3P61009 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SPCS3P61009 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.13□□□□□ -1.91
SPCS3P61009 MIR3653-201ENST00000625572 110 ntBASIC3.13□□□□□ -1.91
SPCS3P61009 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.13□□□□□ -1.91
SPCS3P61009 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.13□□□□□ -1.91
SPCS3P61009 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SPCS3P61009 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SPCS3P61009 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.13□□□□□ -1.91
SPCS3P61009 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SPCS3P61009 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
SPCS3P61009 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SPCS3P61009 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SPCS3P61009 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
SPCS3P61009 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SPCS3P61009 IGKV7-3-201ENST00000357453 298 ntBASIC3.12□□□□□ -1.91
SPCS3P61009 MIR192-201ENST00000384915 110 ntBASIC3.12□□□□□ -1.91
SPCS3P61009 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms