Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
VSX2P58304 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.63□□□□□ -1.83
VSX2P58304 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VSX2P58304 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VSX2P58304 AC083799.1-201ENST00000366451 910 ntBASIC3.63□□□□□ -1.83
VSX2P58304 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
VSX2P58304 ATP5F1P3-201ENST00000397213 657 ntBASIC3.63□□□□□ -1.83
VSX2P58304 Z98941.1-201ENST00000407764 100 ntBASIC3.63□□□□□ -1.83
VSX2P58304 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.63□□□□□ -1.83
VSX2P58304 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.63□□□□□ -1.83
VSX2P58304 AC007389.2-201ENST00000434630 306 ntBASIC3.63□□□□□ -1.83
VSX2P58304 RPS26P40-201ENST00000435209 294 ntBASIC3.63□□□□□ -1.83
VSX2P58304 AC092013.1-201ENST00000438795 332 ntBASIC3.63□□□□□ -1.83
VSX2P58304 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.63□□□□□ -1.83
VSX2P58304 HMGB1P3-201ENST00000502802 616 ntBASIC3.63□□□□□ -1.83
VSX2P58304 RNA5SP164-201ENST00000516533 110 ntBASIC3.63□□□□□ -1.83
VSX2P58304 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.63□□□□□ -1.83
VSX2P58304 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.63□□□□□ -1.83
VSX2P58304 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.63□□□□□ -1.83
VSX2P58304 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.63□□□□□ -1.83
VSX2P58304 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.63□□□□□ -1.83
VSX2P58304 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.63□□□□□ -1.83
VSX2P58304 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.63□□□□□ -1.83
VSX2P58304 MIR4716-201ENST00000579628 84 ntBASIC3.63□□□□□ -1.83
VSX2P58304 MIR4429-201ENST00000580105 73 ntBASIC3.63□□□□□ -1.83
VSX2P58304 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.63□□□□□ -1.83
VSX2P58304 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.63□□□□□ -1.83
VSX2P58304 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.63□□□□□ -1.83
VSX2P58304 AC245128.3-201ENST00000594721 748 ntBASIC3.63□□□□□ -1.83
VSX2P58304 AC083899.3-201ENST00000603413 594 ntBASIC3.63□□□□□ -1.83
VSX2P58304 AC135803.1-201ENST00000608748 565 ntBASIC3.63□□□□□ -1.83
VSX2P58304 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.63□□□□□ -1.83
VSX2P58304 AC009032.1-201ENST00000617574 431 ntBASIC3.63□□□□□ -1.83
VSX2P58304 MTND4P10-201ENST00000446199 1363 ntBASIC3.63□□□□□ -1.83
VSX2P58304 AC024560.2-201ENST00000507981 1497 ntBASIC3.62□□□□□ -1.83
VSX2P58304 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.62□□□□□ -1.83
VSX2P58304 BDP1P-201ENST00000582658 1990 ntBASIC3.62□□□□□ -1.83
VSX2P58304 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
VSX2P58304 AL389915.1-201ENST00000422463 466 ntBASIC3.62□□□□□ -1.83
VSX2P58304 AL139247.1-201ENST00000422768 325 ntBASIC3.62□□□□□ -1.83
VSX2P58304 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.62□□□□□ -1.83
VSX2P58304 AL606490.7-201ENST00000433136 191 ntBASIC3.62□□□□□ -1.83
VSX2P58304 AL035246.1-201ENST00000433554 1255 ntBASIC3.62□□□□□ -1.83
VSX2P58304 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VSX2P58304 AC091153.1-201ENST00000466297 402 ntBASIC3.62□□□□□ -1.83
VSX2P58304 AC087385.1-201ENST00000475062 312 ntBASIC3.62□□□□□ -1.83
VSX2P58304 AC108941.1-201ENST00000502853 530 ntBASIC3.62□□□□□ -1.83
VSX2P58304 RAC1P2-201ENST00000511164 579 ntBASIC3.62□□□□□ -1.83
VSX2P58304 HMGB1P47-201ENST00000511281 589 ntBASIC3.62□□□□□ -1.83
VSX2P58304 RNA5SP208-201ENST00000516156 78 ntBASIC3.62□□□□□ -1.83
VSX2P58304 RNA5SP309-201ENST00000516670 106 ntBASIC3.62□□□□□ -1.83
VSX2P58304 RNU6-889P-201ENST00000517189 103 ntBASIC3.62□□□□□ -1.83
VSX2P58304 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.62□□□□□ -1.83
VSX2P58304 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.62□□□□□ -1.83
VSX2P58304 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.62□□□□□ -1.83
VSX2P58304 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.62□□□□□ -1.83
VSX2P58304 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.62□□□□□ -1.83
VSX2P58304 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.62□□□□□ -1.83
VSX2P58304 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.62□□□□□ -1.83
VSX2P58304 AP004372.1-201ENST00000604842 844 ntBASIC3.62□□□□□ -1.83
VSX2P58304 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.62□□□□□ -1.83
VSX2P58304 AC084036.1-201ENST00000609190 508 ntBASIC3.62□□□□□ -1.83
VSX2P58304 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.62□□□□□ -1.83
VSX2P58304 ATE1-AS1-202ENST00000636460 506 ntBASIC3.62□□□□□ -1.83
VSX2P58304 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VSX2P58304 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.62□□□□□ -1.83
VSX2P58304 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VSX2P58304 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
VSX2P58304 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VSX2P58304 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
VSX2P58304 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
VSX2P58304 U8.11-201ENST00000384699 133 ntBASIC3.61□□□□□ -1.83
VSX2P58304 U8.12-201ENST00000384701 133 ntBASIC3.61□□□□□ -1.83
VSX2P58304 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
VSX2P58304 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
VSX2P58304 RHEBP3-201ENST00000411920 351 ntBASIC3.61□□□□□ -1.83
VSX2P58304 MTND4P11-201ENST00000417020 1058 ntBASIC3.61□□□□□ -1.83
VSX2P58304 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.61□□□□□ -1.83
VSX2P58304 MTCYBP12-201ENST00000440559 1134 ntBASIC3.61□□□□□ -1.83
VSX2P58304 NOTCH2P1-201ENST00000443481 624 ntBASIC3.61□□□□□ -1.83
VSX2P58304 SETD6P1-201ENST00000444575 317 ntBASIC3.61□□□□□ -1.83
VSX2P58304 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VSX2P58304 AL500522.2-201ENST00000448562 343 ntBASIC3.61□□□□□ -1.83
VSX2P58304 HMGB1P5-202ENST00000451497 985 ntBASIC3.61□□□□□ -1.83
VSX2P58304 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.61□□□□□ -1.83
VSX2P58304 U8.18-201ENST00000459285 133 ntBASIC3.61□□□□□ -1.83
VSX2P58304 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.61□□□□□ -1.83
VSX2P58304 ACTR3P3-201ENST00000480448 893 ntBASIC3.61□□□□□ -1.83
VSX2P58304 SUMO1P1-201ENST00000497904 306 ntBASIC3.61□□□□□ -1.83
VSX2P58304 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.61□□□□□ -1.83
VSX2P58304 SNORA70.14-201ENST00000516205 110 ntBASIC3.61□□□□□ -1.83
VSX2P58304 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.61□□□□□ -1.83
VSX2P58304 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.61□□□□□ -1.83
VSX2P58304 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.61□□□□□ -1.83
VSX2P58304 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.61□□□□□ -1.83
VSX2P58304 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.61□□□□□ -1.83
VSX2P58304 AC090877.1-201ENST00000561418 344 ntBASIC3.61□□□□□ -1.83
VSX2P58304 AL109741.3-201ENST00000561748 592 ntBASIC3.61□□□□□ -1.83
VSX2P58304 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.61□□□□□ -1.83
VSX2P58304 MTATP6P25-201ENST00000574491 261 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms