Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 RPS20P21-201ENST00000466859 343 ntBASIC4.2□□□□□ -1.74
PEX3P56589 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.2□□□□□ -1.74
PEX3P56589 AC108941.1-201ENST00000502853 530 ntBASIC4.2□□□□□ -1.74
PEX3P56589 MTND3P3-201ENST00000505004 126 ntBASIC4.2□□□□□ -1.74
PEX3P56589 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PEX3P56589 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.2□□□□□ -1.74
PEX3P56589 RNA5SP208-201ENST00000516156 78 ntBASIC4.2□□□□□ -1.74
PEX3P56589 SNORA31.13-201ENST00000516624 135 ntBASIC4.2□□□□□ -1.74
PEX3P56589 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.2□□□□□ -1.74
PEX3P56589 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.2□□□□□ -1.74
PEX3P56589 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PEX3P56589 CIR1P1-201ENST00000524055 1133 ntBASIC4.2□□□□□ -1.74
PEX3P56589 MTND5P21-201ENST00000531961 522 ntBASIC4.2□□□□□ -1.74
PEX3P56589 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.2□□□□□ -1.74
PEX3P56589 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.2□□□□□ -1.74
PEX3P56589 AL049844.2-201ENST00000604280 628 ntBASIC4.2□□□□□ -1.74
PEX3P56589 SUMO2P14-201ENST00000604488 293 ntBASIC4.2□□□□□ -1.74
PEX3P56589 AP003392.5-201ENST00000607857 415 ntBASIC4.2□□□□□ -1.74
PEX3P56589 AL354760.1-201ENST00000608357 643 ntBASIC4.2□□□□□ -1.74
PEX3P56589 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.2□□□□□ -1.74
PEX3P56589 AC011472.4-201ENST00000615848 491 ntBASIC4.2□□□□□ -1.74
PEX3P56589 AC079684.1-201ENST00000621405 437 ntBASIC4.2□□□□□ -1.74
PEX3P56589 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.2□□□□□ -1.74
PEX3P56589 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PEX3P56589 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
PEX3P56589 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PEX3P56589 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PEX3P56589 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.19□□□□□ -1.74
PEX3P56589 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PEX3P56589 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
PEX3P56589 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.19□□□□□ -1.74
PEX3P56589 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PEX3P56589 SNORA63.3-201ENST00000362682 132 ntBASIC4.19□□□□□ -1.74
PEX3P56589 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PEX3P56589 MIR3074-201ENST00000384885 81 ntBASIC4.19□□□□□ -1.74
PEX3P56589 MIR134-201ENST00000385258 73 ntBASIC4.19□□□□□ -1.74
PEX3P56589 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PEX3P56589 LINC01347-201ENST00000417964 355 ntBASIC4.19□□□□□ -1.74
PEX3P56589 MTND2P15-201ENST00000418575 892 ntBASIC4.19□□□□□ -1.74
PEX3P56589 CYP4F29P-201ENST00000420685 446 ntBASIC4.19□□□□□ -1.74
PEX3P56589 AL139247.1-201ENST00000422768 325 ntBASIC4.19□□□□□ -1.74
PEX3P56589 MTCO2P1-201ENST00000424648 477 ntBASIC4.19□□□□□ -1.74
PEX3P56589 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.19□□□□□ -1.74
PEX3P56589 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.19□□□□□ -1.74
PEX3P56589 AL591419.1-201ENST00000427423 339 ntBASIC4.19□□□□□ -1.74
PEX3P56589 YWHAEP5-201ENST00000431545 765 ntBASIC4.19□□□□□ -1.74
PEX3P56589 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.19□□□□□ -1.74
PEX3P56589 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.19□□□□□ -1.74
PEX3P56589 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.19□□□□□ -1.74
PEX3P56589 MTCYBP21-201ENST00000443300 1113 ntBASIC4.19□□□□□ -1.74
PEX3P56589 AC069540.1-201ENST00000446320 988 ntBASIC4.19□□□□□ -1.74
PEX3P56589 AL359073.1-201ENST00000448036 403 ntBASIC4.19□□□□□ -1.74
PEX3P56589 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PEX3P56589 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.19□□□□□ -1.74
PEX3P56589 AL133477.1-201ENST00000457472 514 ntBASIC4.19□□□□□ -1.74
PEX3P56589 AC084198.1-201ENST00000477747 402 ntBASIC4.19□□□□□ -1.74
PEX3P56589 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.19□□□□□ -1.74
PEX3P56589 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
PEX3P56589 AC121161.1-201ENST00000510606 652 ntBASIC4.19□□□□□ -1.74
PEX3P56589 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.19□□□□□ -1.74
PEX3P56589 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.19□□□□□ -1.74
PEX3P56589 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.19□□□□□ -1.74
PEX3P56589 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.19□□□□□ -1.74
PEX3P56589 AC008083.2-201ENST00000546707 476 ntBASIC4.19□□□□□ -1.74
PEX3P56589 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PEX3P56589 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.19□□□□□ -1.74
PEX3P56589 AC106734.1-201ENST00000568646 663 ntBASIC4.19□□□□□ -1.74
PEX3P56589 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.19□□□□□ -1.74
PEX3P56589 AC068880.4-201ENST00000623082 495 ntBASIC4.19□□□□□ -1.74
PEX3P56589 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.19□□□□□ -1.74
PEX3P56589 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PEX3P56589 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
PEX3P56589 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PEX3P56589 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.19□□□□□ -1.74
PEX3P56589 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.19□□□□□ -1.74
PEX3P56589 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PEX3P56589 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PEX3P56589 AC024560.2-201ENST00000507981 1497 ntBASIC4.18□□□□□ -1.74
PEX3P56589 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
PEX3P56589 AC018555.1-201ENST00000567548 1980 ntBASIC4.18□□□□□ -1.74
PEX3P56589 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PEX3P56589 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.18□□□□□ -1.74
PEX3P56589 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.18□□□□□ -1.74
PEX3P56589 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PEX3P56589 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.18□□□□□ -1.74
PEX3P56589 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PEX3P56589 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PEX3P56589 RNU6-185P-201ENST00000384421 107 ntBASIC4.18□□□□□ -1.74
PEX3P56589 RNU6-1005P-201ENST00000384519 107 ntBASIC4.18□□□□□ -1.74
PEX3P56589 AL590704.1-201ENST00000402856 794 ntBASIC4.18□□□□□ -1.74
PEX3P56589 SNORA57.3-201ENST00000411095 141 ntBASIC4.18□□□□□ -1.74
PEX3P56589 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PEX3P56589 AL391219.1-201ENST00000422570 483 ntBASIC4.18□□□□□ -1.74
PEX3P56589 PNRC2P1-201ENST00000423940 420 ntBASIC4.18□□□□□ -1.74
PEX3P56589 RWDD4P2-201ENST00000426392 563 ntBASIC4.18□□□□□ -1.74
PEX3P56589 AL445584.1-201ENST00000431451 330 ntBASIC4.18□□□□□ -1.74
PEX3P56589 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.18□□□□□ -1.74
PEX3P56589 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.18□□□□□ -1.74
PEX3P56589 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.18□□□□□ -1.74
PEX3P56589 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms