Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDH4P55283 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH4P55283 MTND3P4-201ENST00000453537 303 ntBASIC3.94□□□□□ -1.78
CDH4P55283 SYT14P1-201ENST00000481459 721 ntBASIC3.94□□□□□ -1.78
CDH4P55283 HNRNPKP5-201ENST00000515300 253 ntBASIC3.94□□□□□ -1.78
CDH4P55283 SNORA48.9-201ENST00000516419 162 ntBASIC3.94□□□□□ -1.78
CDH4P55283 SCARNA14-201ENST00000516903 136 ntBASIC3.94□□□□□ -1.78
CDH4P55283 AC008802.1-201ENST00000519121 791 ntBASIC3.94□□□□□ -1.78
CDH4P55283 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH4P55283 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH4P55283 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH4P55283 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH4P55283 AP001180.3-201ENST00000582221 145 ntBASIC3.94□□□□□ -1.78
CDH4P55283 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH4P55283 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH4P55283 AC010680.4-201ENST00000605334 543 ntBASIC3.94□□□□□ -1.78
CDH4P55283 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH4P55283 AP003392.5-201ENST00000607857 415 ntBASIC3.94□□□□□ -1.78
CDH4P55283 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH4P55283 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH4P55283 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH4P55283 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH4P55283 AC233309.1-201ENST00000619522 751 ntBASIC3.94□□□□□ -1.78
CDH4P55283 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH4P55283 AC024023.1-201ENST00000624530 922 ntBASIC3.94□□□□□ -1.78
CDH4P55283 ATE1-AS1-202ENST00000636460 506 ntBASIC3.94□□□□□ -1.78
CDH4P55283 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH4P55283 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CDH4P55283 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDH4P55283 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH4P55283 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.94□□□□□ -1.78
CDH4P55283 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH4P55283 AL627171.1-201ENST00000618845 1308 ntBASIC3.94□□□□□ -1.78
CDH4P55283 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CDH4P55283 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.93□□□□□ -1.78
CDH4P55283 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.93□□□□□ -1.78
CDH4P55283 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDH4P55283 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.93□□□□□ -1.78
CDH4P55283 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDH4P55283 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.93□□□□□ -1.78
CDH4P55283 OR4A15-201ENST00000314706 1035 ntBASIC3.93□□□□□ -1.78
CDH4P55283 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDH4P55283 RPL32P23-201ENST00000397237 405 ntBASIC3.93□□□□□ -1.78
CDH4P55283 CCNB2P1-201ENST00000399411 1150 ntBASIC3.93□□□□□ -1.78
CDH4P55283 CYCSP19-201ENST00000411715 316 ntBASIC3.93□□□□□ -1.78
CDH4P55283 AC004987.3-201ENST00000413879 771 ntBASIC3.93□□□□□ -1.78
CDH4P55283 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CDH4P55283 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH4P55283 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH4P55283 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH4P55283 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH4P55283 ATP5HP2-201ENST00000433885 485 ntBASIC3.93□□□□□ -1.78
CDH4P55283 RRM2P4-201ENST00000441721 562 ntBASIC3.93□□□□□ -1.78
CDH4P55283 AC007688.1-201ENST00000475592 759 ntBASIC3.93□□□□□ -1.78
CDH4P55283 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.93□□□□□ -1.78
CDH4P55283 AC068305.1-201ENST00000497406 726 ntBASIC3.93□□□□□ -1.78
CDH4P55283 AC108941.1-201ENST00000502853 530 ntBASIC3.93□□□□□ -1.78
CDH4P55283 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.93□□□□□ -1.78
CDH4P55283 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.93□□□□□ -1.78
CDH4P55283 AC110792.2-201ENST00000510278 224 ntBASIC3.93□□□□□ -1.78
CDH4P55283 AC093853.1-201ENST00000515689 483 ntBASIC3.93□□□□□ -1.78
CDH4P55283 SNORA31.13-201ENST00000516624 135 ntBASIC3.93□□□□□ -1.78
CDH4P55283 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH4P55283 AC022695.1-201ENST00000522089 237 ntBASIC3.93□□□□□ -1.78
CDH4P55283 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.93□□□□□ -1.78
CDH4P55283 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.93□□□□□ -1.78
CDH4P55283 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.93□□□□□ -1.78
CDH4P55283 AC087499.8-201ENST00000578406 226 ntBASIC3.93□□□□□ -1.78
CDH4P55283 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.93□□□□□ -1.78
CDH4P55283 AP000919.1-202ENST00000581139 1264 ntBASIC3.93□□□□□ -1.78
CDH4P55283 AC110741.2-201ENST00000605278 268 ntBASIC3.93□□□□□ -1.78
CDH4P55283 AL354760.1-201ENST00000608357 643 ntBASIC3.93□□□□□ -1.78
CDH4P55283 AL136964.1-201ENST00000622038 2990 ntBASIC3.93□□□□□ -1.78
CDH4P55283 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDH4P55283 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.93□□□□□ -1.78
CDH4P55283 DCAF13P3-201ENST00000561147 1334 ntBASIC3.93□□□□□ -1.78
CDH4P55283 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDH4P55283 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDH4P55283 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.92□□□□□ -1.78
CDH4P55283 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CDH4P55283 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDH4P55283 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDH4P55283 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH4P55283 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH4P55283 MIR124-3-201ENST00000384866 87 ntBASIC3.92□□□□□ -1.78
CDH4P55283 HMGB1P13-201ENST00000406019 642 ntBASIC3.92□□□□□ -1.78
CDH4P55283 SNORA57.3-201ENST00000411095 141 ntBASIC3.92□□□□□ -1.78
CDH4P55283 AL390879.2-203ENST00000426943 1121 ntBASIC3.92□□□□□ -1.78
CDH4P55283 AL591419.1-201ENST00000427423 339 ntBASIC3.92□□□□□ -1.78
CDH4P55283 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH4P55283 AC122718.1-201ENST00000439448 744 ntBASIC3.92□□□□□ -1.78
CDH4P55283 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH4P55283 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
CDH4P55283 FAM133DP-201ENST00000464802 691 ntBASIC3.92□□□□□ -1.78
CDH4P55283 HMGB1P21-201ENST00000502313 581 ntBASIC3.92□□□□□ -1.78
CDH4P55283 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.92□□□□□ -1.78
CDH4P55283 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.92□□□□□ -1.78
CDH4P55283 RN7SKP82-201ENST00000516786 223 ntBASIC3.92□□□□□ -1.78
CDH4P55283 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.92□□□□□ -1.78
CDH4P55283 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms