Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NKX2-5P52952 HMGB3P19-201ENST00000403971 560 ntBASIC3.14□□□□□ -1.91
NKX2-5P52952 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC3.14□□□□□ -1.91
NKX2-5P52952 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.14□□□□□ -1.91
NKX2-5P52952 HIGD1AP12-201ENST00000427832 281 ntBASIC3.14□□□□□ -1.91
NKX2-5P52952 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.14□□□□□ -1.91
NKX2-5P52952 HIGD1AP4-201ENST00000430194 280 ntBASIC3.14□□□□□ -1.91
NKX2-5P52952 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.14□□□□□ -1.91
NKX2-5P52952 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC3.14□□□□□ -1.91
NKX2-5P52952 RPS4XP4-201ENST00000443195 763 ntBASIC3.14□□□□□ -1.91
NKX2-5P52952 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.14□□□□□ -1.91
NKX2-5P52952 AC092691.2-201ENST00000461787 803 ntBASIC3.14□□□□□ -1.91
NKX2-5P52952 RPL21P104-201ENST00000464143 478 ntBASIC3.14□□□□□ -1.91
NKX2-5P52952 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.14□□□□□ -1.91
NKX2-5P52952 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC3.14□□□□□ -1.91
NKX2-5P52952 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.14□□□□□ -1.91
NKX2-5P52952 TMEM248P1-201ENST00000510579 951 ntBASIC3.14□□□□□ -1.91
NKX2-5P52952 RN7SKP21-201ENST00000516503 220 ntBASIC3.14□□□□□ -1.91
NKX2-5P52952 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.14□□□□□ -1.91
NKX2-5P52952 RNA5SP34-201ENST00000516887 130 ntBASIC3.14□□□□□ -1.91
NKX2-5P52952 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.14□□□□□ -1.91
NKX2-5P52952 AC105233.3-201ENST00000531125 744 ntBASIC3.14□□□□□ -1.91
NKX2-5P52952 AC009643.1-201ENST00000532030 391 ntBASIC3.14□□□□□ -1.91
NKX2-5P52952 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.14□□□□□ -1.91
NKX2-5P52952 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.14□□□□□ -1.91
NKX2-5P52952 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.14□□□□□ -1.91
NKX2-5P52952 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC3.14□□□□□ -1.91
NKX2-5P52952 AC009117.1-201ENST00000563948 554 ntBASIC3.14□□□□□ -1.91
NKX2-5P52952 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.14□□□□□ -1.91
NKX2-5P52952 AC245128.3-201ENST00000594721 748 ntBASIC3.14□□□□□ -1.91
NKX2-5P52952 BNIP3P38-201ENST00000601117 544 ntBASIC3.14□□□□□ -1.91
NKX2-5P52952 AL031320.1-201ENST00000604177 357 ntBASIC3.14□□□□□ -1.91
NKX2-5P52952 AC016877.3-201ENST00000606778 504 ntBASIC3.14□□□□□ -1.91
NKX2-5P52952 AC019193.2-201ENST00000610012 634 ntBASIC3.14□□□□□ -1.91
NKX2-5P52952 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.14□□□□□ -1.91
NKX2-5P52952 MIR6826-201ENST00000617808 98 ntBASIC3.14□□□□□ -1.91
NKX2-5P52952 AC112200.1-201ENST00000625015 234 ntBASIC3.14□□□□□ -1.91
NKX2-5P52952 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.14□□□□□ -1.91
NKX2-5P52952 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.14□□□□□ -1.91
NKX2-5P52952 AL355578.1-201ENST00000607405 1328 ntBASIC3.14□□□□□ -1.91
NKX2-5P52952 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.14□□□□□ -1.91
NKX2-5P52952 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.14□□□□□ -1.91
NKX2-5P52952 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.13□□□□□ -1.91
NKX2-5P52952 AC022031.1-201ENST00000585985 2593 ntBASIC3.13□□□□□ -1.91
NKX2-5P52952 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.13□□□□□ -1.91
NKX2-5P52952 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
NKX2-5P52952 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NKX2-5P52952 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.13□□□□□ -1.91
NKX2-5P52952 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NKX2-5P52952 RNA5SP42-201ENST00000364278 115 ntBASIC3.13□□□□□ -1.91
NKX2-5P52952 HMGB3P18-201ENST00000406327 590 ntBASIC3.13□□□□□ -1.91
NKX2-5P52952 SNORA11F-201ENST00000408237 128 ntBASIC3.13□□□□□ -1.91
NKX2-5P52952 RPS15AP40-201ENST00000419621 391 ntBASIC3.13□□□□□ -1.91
NKX2-5P52952 AC244098.2-201ENST00000422068 99 ntBASIC3.13□□□□□ -1.91
NKX2-5P52952 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.13□□□□□ -1.91
NKX2-5P52952 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.13□□□□□ -1.91
NKX2-5P52952 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC3.13□□□□□ -1.91
NKX2-5P52952 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.13□□□□□ -1.91
NKX2-5P52952 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.13□□□□□ -1.91
NKX2-5P52952 EIF4EBP2P1-201ENST00000450009 343 ntBASIC3.13□□□□□ -1.91
NKX2-5P52952 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.13□□□□□ -1.91
NKX2-5P52952 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.13□□□□□ -1.91
NKX2-5P52952 NF1P3-201ENST00000457709 450 ntBASIC3.13□□□□□ -1.91
NKX2-5P52952 RPL21P18-201ENST00000469899 480 ntBASIC3.13□□□□□ -1.91
NKX2-5P52952 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.13□□□□□ -1.91
NKX2-5P52952 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NKX2-5P52952 AC012181.1-201ENST00000479895 423 ntBASIC3.13□□□□□ -1.91
NKX2-5P52952 RPL23AP73-201ENST00000492507 471 ntBASIC3.13□□□□□ -1.91
NKX2-5P52952 OR5H3P-201ENST00000502817 919 ntBASIC3.13□□□□□ -1.91
NKX2-5P52952 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.13□□□□□ -1.91
NKX2-5P52952 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.13□□□□□ -1.91
NKX2-5P52952 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.13□□□□□ -1.91
NKX2-5P52952 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.13□□□□□ -1.91
NKX2-5P52952 AP002812.4-201ENST00000532139 286 ntBASIC3.13□□□□□ -1.91
NKX2-5P52952 AC074029.1-201ENST00000552531 1044 ntBASIC3.13□□□□□ -1.91
NKX2-5P52952 AL163153.1-201ENST00000554223 283 ntBASIC3.13□□□□□ -1.91
NKX2-5P52952 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC3.13□□□□□ -1.91
NKX2-5P52952 AC115989.2-201ENST00000578640 563 ntBASIC3.13□□□□□ -1.91
NKX2-5P52952 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.13□□□□□ -1.91
NKX2-5P52952 ZNF92P3-201ENST00000596594 954 ntBASIC3.13□□□□□ -1.91
NKX2-5P52952 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.13□□□□□ -1.91
NKX2-5P52952 SNRPGP15-201ENST00000600149 222 ntBASIC3.13□□□□□ -1.91
NKX2-5P52952 AC068790.7-201ENST00000602347 528 ntBASIC3.13□□□□□ -1.91
NKX2-5P52952 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.13□□□□□ -1.91
NKX2-5P52952 HMGN2P28-201ENST00000606102 262 ntBASIC3.13□□□□□ -1.91
NKX2-5P52952 AC107294.3-201ENST00000609211 526 ntBASIC3.13□□□□□ -1.91
NKX2-5P52952 uc_338.13-201ENST00000618243 179 ntBASIC3.13□□□□□ -1.91
NKX2-5P52952 AC079684.1-201ENST00000621405 437 ntBASIC3.13□□□□□ -1.91
NKX2-5P52952 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
NKX2-5P52952 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NKX2-5P52952 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NKX2-5P52952 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NKX2-5P52952 MTND4P34-201ENST00000572715 1371 ntBASIC3.12□□□□□ -1.91
NKX2-5P52952 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NKX2-5P52952 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NKX2-5P52952 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NKX2-5P52952 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
NKX2-5P52952 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NKX2-5P52952 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
NKX2-5P52952 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms