Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC6.21□□□□□ -1.42
RNF144AP50876 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.21□□□□□ -1.42
RNF144AP50876 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC6.21□□□□□ -1.42
RNF144AP50876 RPS27AP19-201ENST00000597285 458 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 AL590032.1-201ENST00000604920 252 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 AC133644.2-201ENST00000608142 540 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 AC103710.2-201ENST00000609912 942 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 AC245517.5-201ENST00000611529 162 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 AL627230.1-201ENST00000613077 211 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 MIR8062-201ENST00000621515 85 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.21□□□□□ -1.42
RNF144AP50876 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RNF144AP50876 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RNF144AP50876 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RNF144AP50876 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.21□□□□□ -1.42
RNF144AP50876 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RNF144AP50876 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
RNF144AP50876 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RNF144AP50876 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RNF144AP50876 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
RNF144AP50876 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
RNF144AP50876 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RNF144AP50876 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
RNF144AP50876 AC025809.2-201ENST00000625085 1802 ntBASIC6.2□□□□□ -1.42
RNF144AP50876 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC6.2□□□□□ -1.42
RNF144AP50876 TRIM51GP-201ENST00000534741 1350 ntBASIC6.2□□□□□ -1.42
RNF144AP50876 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RNF144AP50876 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RNF144AP50876 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RNF144AP50876 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
RNF144AP50876 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.2□□□□□ -1.42
RNF144AP50876 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF144AP50876 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.2□□□□□ -1.42
RNF144AP50876 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
RNF144AP50876 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
RNF144AP50876 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF144AP50876 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF144AP50876 RNU6-266P-201ENST00000364225 107 ntBASIC6.2□□□□□ -1.42
RNF144AP50876 SNORA70.3-201ENST00000365075 132 ntBASIC6.2□□□□□ -1.42
RNF144AP50876 RHOT1P2-201ENST00000366423 333 ntBASIC6.2□□□□□ -1.42
RNF144AP50876 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF144AP50876 RNU6-441P-201ENST00000384545 106 ntBASIC6.2□□□□□ -1.42
RNF144AP50876 RNU1-56P-201ENST00000391303 164 ntBASIC6.2□□□□□ -1.42
RNF144AP50876 AL031985.1-201ENST00000392713 418 ntBASIC6.2□□□□□ -1.42
RNF144AP50876 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.2□□□□□ -1.42
RNF144AP50876 AC000089.1-201ENST00000424559 801 ntBASIC6.2□□□□□ -1.42
RNF144AP50876 AC239367.3-201ENST00000428996 814 ntBASIC6.2□□□□□ -1.42
RNF144AP50876 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.2□□□□□ -1.42
RNF144AP50876 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC6.2□□□□□ -1.42
RNF144AP50876 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.2□□□□□ -1.42
RNF144AP50876 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC6.2□□□□□ -1.42
RNF144AP50876 HSFY6P-201ENST00000445573 403 ntBASIC6.2□□□□□ -1.42
RNF144AP50876 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.2□□□□□ -1.42
RNF144AP50876 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC6.2□□□□□ -1.42
RNF144AP50876 RN7SL492P-201ENST00000460700 295 ntBASIC6.2□□□□□ -1.42
RNF144AP50876 AC079804.1-201ENST00000461922 436 ntBASIC6.2□□□□□ -1.42
RNF144AP50876 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.2□□□□□ -1.42
RNF144AP50876 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
RNF144AP50876 RPL7L1P7-201ENST00000509986 724 ntBASIC6.2□□□□□ -1.42
RNF144AP50876 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.2□□□□□ -1.42
RNF144AP50876 Y_RNA.680-201ENST00000516441 93 ntBASIC6.2□□□□□ -1.42
RNF144AP50876 Y_RNA.708-201ENST00000516950 96 ntBASIC6.2□□□□□ -1.42
RNF144AP50876 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC6.2□□□□□ -1.42
RNF144AP50876 CYCSP28-201ENST00000534284 321 ntBASIC6.2□□□□□ -1.42
RNF144AP50876 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC6.2□□□□□ -1.42
RNF144AP50876 AC135001.1-201ENST00000544546 283 ntBASIC6.2□□□□□ -1.42
RNF144AP50876 AC125612.1-201ENST00000547580 377 ntBASIC6.2□□□□□ -1.42
RNF144AP50876 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.2□□□□□ -1.42
RNF144AP50876 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC6.2□□□□□ -1.42
RNF144AP50876 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.2□□□□□ -1.42
RNF144AP50876 AC004232.1-201ENST00000571388 208 ntBASIC6.2□□□□□ -1.42
RNF144AP50876 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC6.2□□□□□ -1.42
RNF144AP50876 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.2□□□□□ -1.42
RNF144AP50876 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.2□□□□□ -1.42
RNF144AP50876 AC009229.3-201ENST00000608056 282 ntBASIC6.2□□□□□ -1.42
RNF144AP50876 AC091768.1-201ENST00000609258 930 ntBASIC6.2□□□□□ -1.42
RNF144AP50876 ATP5A1P2-202ENST00000616464 443 ntBASIC6.2□□□□□ -1.42
RNF144AP50876 AC010168.2-201ENST00000562691 5428 ntBASIC6.2□□□□□ -1.42
RNF144AP50876 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
RNF144AP50876 AC107021.2-201ENST00000567714 2095 ntBASIC6.2□□□□□ -1.42
RNF144AP50876 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.2□□□□□ -1.42
RNF144AP50876 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF144AP50876 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
RNF144AP50876 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.2□□□□□ -1.42
RNF144AP50876 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.2□□□□□ -1.42
RNF144AP50876 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF144AP50876 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
RNF144AP50876 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF144AP50876 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF144AP50876 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF144AP50876 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RNF144AP50876 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF144AP50876 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF144AP50876 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RNF144AP50876 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
RNF144AP50876 AC009120.2-204ENST00000621548 2032 ntBASIC6.2□□□□□ -1.42
RNF144AP50876 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RNF144AP50876 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF144AP50876 AL139384.2-201ENST00000613809 3590 ntBASIC6.19□□□□□ -1.42
RNF144AP50876 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms