Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.56□□□□□ -1.84
HTTP42858 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HTTP42858 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
HTTP42858 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.56□□□□□ -1.84
HTTP42858 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HTTP42858 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.56□□□□□ -1.84
HTTP42858 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.56□□□□□ -1.84
HTTP42858 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.56□□□□□ -1.84
HTTP42858 AC090312.2-201ENST00000582687 378 ntBASIC3.56□□□□□ -1.84
HTTP42858 BRDTP1-201ENST00000605735 677 ntBASIC3.56□□□□□ -1.84
HTTP42858 AC064859.1-201ENST00000624741 174 ntBASIC3.56□□□□□ -1.84
HTTP42858 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HTTP42858 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.56□□□□□ -1.84
HTTP42858 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HTTP42858 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HTTP42858 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.56□□□□□ -1.84
HTTP42858 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HTTP42858 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC3.55□□□□□ -1.84
HTTP42858 DPPA2P2-201ENST00000418220 897 ntBASIC3.55□□□□□ -1.84
HTTP42858 MYL8P-204ENST00000431574 518 ntBASIC3.55□□□□□ -1.84
HTTP42858 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.55□□□□□ -1.84
HTTP42858 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC3.55□□□□□ -1.84
HTTP42858 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.55□□□□□ -1.84
HTTP42858 IGHVIII-44-202ENST00000636235 289 ntBASIC3.55□□□□□ -1.84
HTTP42858 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HTTP42858 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.55□□□□□ -1.84
HTTP42858 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
HTTP42858 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HTTP42858 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HTTP42858 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HTTP42858 SNORA70B-201ENST00000384210 135 ntBASIC3.55□□□□□ -1.84
HTTP42858 AL353692.2-201ENST00000407054 335 ntBASIC3.55□□□□□ -1.84
HTTP42858 HIGD1AP13-201ENST00000509878 289 ntBASIC3.55□□□□□ -1.84
HTTP42858 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.55□□□□□ -1.84
HTTP42858 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.55□□□□□ -1.84
HTTP42858 AC015849.2-201ENST00000605738 409 ntBASIC3.55□□□□□ -1.84
HTTP42858 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HTTP42858 AL078595.2-201ENST00000605309 1780 ntBASIC3.55□□□□□ -1.84
HTTP42858 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
HTTP42858 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.55□□□□□ -1.84
HTTP42858 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HTTP42858 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HTTP42858 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
HTTP42858 AC073325.2-201ENST00000339545 159 ntBASIC3.55□□□□□ -1.84
HTTP42858 RN7SKP220-201ENST00000410611 288 ntBASIC3.55□□□□□ -1.84
HTTP42858 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.55□□□□□ -1.84
HTTP42858 FTLP19-201ENST00000433300 394 ntBASIC3.55□□□□□ -1.84
HTTP42858 AC092809.1-201ENST00000441469 474 ntBASIC3.55□□□□□ -1.84
HTTP42858 APOOP4-201ENST00000513530 597 ntBASIC3.55□□□□□ -1.84
HTTP42858 RNA5SP367-201ENST00000516557 118 ntBASIC3.55□□□□□ -1.84
HTTP42858 AC009812.2-201ENST00000517657 457 ntBASIC3.55□□□□□ -1.84
HTTP42858 RN7SL371P-201ENST00000578099 267 ntBASIC3.55□□□□□ -1.84
HTTP42858 SNORD39.4-201ENST00000620099 78 ntBASIC3.55□□□□□ -1.84
HTTP42858 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.55□□□□□ -1.84
HTTP42858 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HTTP42858 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HTTP42858 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC3.54□□□□□ -1.84
HTTP42858 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HTTP42858 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
HTTP42858 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HTTP42858 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.54□□□□□ -1.84
HTTP42858 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HTTP42858 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.54□□□□□ -1.84
HTTP42858 HMGB3P14-201ENST00000494195 599 ntBASIC3.54□□□□□ -1.84
HTTP42858 AL590808.1-201ENST00000618696 141 ntBASIC3.54□□□□□ -1.84
HTTP42858 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HTTP42858 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.54□□□□□ -1.84
HTTP42858 Y_RNA.466-201ENST00000384294 113 ntBASIC3.54□□□□□ -1.84
HTTP42858 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.54□□□□□ -1.84
HTTP42858 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.54□□□□□ -1.84
HTTP42858 ATP5F1P5-201ENST00000526403 760 ntBASIC3.54□□□□□ -1.84
HTTP42858 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
HTTP42858 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
HTTP42858 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HTTP42858 MAPK10-320ENST00000641462 6696 ntBASIC3.53□□□□□ -1.84
HTTP42858 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HTTP42858 RSL24D1P4-201ENST00000400938 484 ntBASIC3.53□□□□□ -1.84
HTTP42858 AC009963.1-201ENST00000417265 157 ntBASIC3.53□□□□□ -1.84
HTTP42858 HLA-N-201ENST00000437516 135 ntBASIC3.53□□□□□ -1.84
HTTP42858 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.53□□□□□ -1.84
HTTP42858 AC005798.1-201ENST00000513715 387 ntBASIC3.53□□□□□ -1.84
HTTP42858 AC006518.1-201ENST00000541449 943 ntBASIC3.53□□□□□ -1.84
HTTP42858 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.53□□□□□ -1.84
HTTP42858 EIF1P6-201ENST00000600054 334 ntBASIC3.53□□□□□ -1.84
HTTP42858 AC007619.2-201ENST00000605743 379 ntBASIC3.53□□□□□ -1.84
HTTP42858 AC083837.1-201ENST00000565297 2994 ntBASIC3.53□□□□□ -1.84
HTTP42858 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
HTTP42858 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HTTP42858 AL049780.3-201ENST00000624612 1583 ntBASIC3.53□□□□□ -1.84
HTTP42858 AC022018.1-201ENST00000430685 241 ntBASIC3.53□□□□□ -1.84
HTTP42858 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.53□□□□□ -1.84
HTTP42858 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.53□□□□□ -1.84
HTTP42858 AC008549.1-201ENST00000512900 643 ntBASIC3.53□□□□□ -1.84
HTTP42858 RNU6-991P-201ENST00000516168 107 ntBASIC3.53□□□□□ -1.84
HTTP42858 AP001207.2-201ENST00000519490 539 ntBASIC3.53□□□□□ -1.84
HTTP42858 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.53□□□□□ -1.84
HTTP42858 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
HTTP42858 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
HTTP42858 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC3.53□□□□□ -1.84
HTTP42858 AC018529.3-201ENST00000624212 2254 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms