Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RFC3P40938 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.61□□□□□ -1.83
RFC3P40938 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.61□□□□□ -1.83
RFC3P40938 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
RFC3P40938 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
RFC3P40938 AC100871.1-201ENST00000507871 1456 ntBASIC3.6□□□□□ -1.83
RFC3P40938 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
RFC3P40938 MTCO1P8-201ENST00000416914 1523 ntBASIC3.6□□□□□ -1.83
RFC3P40938 XIAPP3-201ENST00000312918 795 ntBASIC3.6□□□□□ -1.83
RFC3P40938 OR4A15-201ENST00000314706 1035 ntBASIC3.6□□□□□ -1.83
RFC3P40938 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.6□□□□□ -1.83
RFC3P40938 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
RFC3P40938 RNA5SP171-201ENST00000391071 115 ntBASIC3.6□□□□□ -1.83
RFC3P40938 PTMAP2-201ENST00000397627 327 ntBASIC3.6□□□□□ -1.83
RFC3P40938 HMGB3P19-201ENST00000403971 560 ntBASIC3.6□□□□□ -1.83
RFC3P40938 RANP4-201ENST00000413361 655 ntBASIC3.6□□□□□ -1.83
RFC3P40938 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.6□□□□□ -1.83
RFC3P40938 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.6□□□□□ -1.83
RFC3P40938 AC017083.1-201ENST00000428093 483 ntBASIC3.6□□□□□ -1.83
RFC3P40938 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RFC3P40938 RRM2P4-201ENST00000441721 562 ntBASIC3.6□□□□□ -1.83
RFC3P40938 YWHAQP9-201ENST00000445891 512 ntBASIC3.6□□□□□ -1.83
RFC3P40938 AL500522.2-201ENST00000448562 343 ntBASIC3.6□□□□□ -1.83
RFC3P40938 SNRPGP5-201ENST00000456003 220 ntBASIC3.6□□□□□ -1.83
RFC3P40938 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.6□□□□□ -1.83
RFC3P40938 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.6□□□□□ -1.83
RFC3P40938 AC034236.1-201ENST00000469891 373 ntBASIC3.6□□□□□ -1.83
RFC3P40938 AC069499.1-201ENST00000489433 509 ntBASIC3.6□□□□□ -1.83
RFC3P40938 FTH1P24-201ENST00000503502 462 ntBASIC3.6□□□□□ -1.83
RFC3P40938 OR5H4P-201ENST00000510851 923 ntBASIC3.6□□□□□ -1.83
RFC3P40938 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.6□□□□□ -1.83
RFC3P40938 AC093853.1-201ENST00000515689 483 ntBASIC3.6□□□□□ -1.83
RFC3P40938 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.6□□□□□ -1.83
RFC3P40938 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.6□□□□□ -1.83
RFC3P40938 MTND1P6-201ENST00000523621 946 ntBASIC3.6□□□□□ -1.83
RFC3P40938 AP002812.4-201ENST00000532139 286 ntBASIC3.6□□□□□ -1.83
RFC3P40938 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.6□□□□□ -1.83
RFC3P40938 ZNF92P3-201ENST00000596594 954 ntBASIC3.6□□□□□ -1.83
RFC3P40938 BNIP3P33-201ENST00000598912 569 ntBASIC3.6□□□□□ -1.83
RFC3P40938 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.6□□□□□ -1.83
RFC3P40938 AL121772.2-201ENST00000614331 297 ntBASIC3.6□□□□□ -1.83
RFC3P40938 AC039056.2-201ENST00000622261 511 ntBASIC3.6□□□□□ -1.83
RFC3P40938 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.6□□□□□ -1.83
RFC3P40938 AP005264.7-201ENST00000625003 745 ntBASIC3.6□□□□□ -1.83
RFC3P40938 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.6□□□□□ -1.83
RFC3P40938 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.6□□□□□ -1.83
RFC3P40938 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
RFC3P40938 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RFC3P40938 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
RFC3P40938 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RFC3P40938 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RFC3P40938 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.6□□□□□ -1.83
RFC3P40938 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.6□□□□□ -1.83
RFC3P40938 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RFC3P40938 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RFC3P40938 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.59□□□□□ -1.83
RFC3P40938 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.59□□□□□ -1.83
RFC3P40938 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
RFC3P40938 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.59□□□□□ -1.83
RFC3P40938 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RFC3P40938 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.59□□□□□ -1.83
RFC3P40938 RN7SKP156-201ENST00000410308 342 ntBASIC3.59□□□□□ -1.83
RFC3P40938 RNU4-74P-201ENST00000411280 161 ntBASIC3.59□□□□□ -1.83
RFC3P40938 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.59□□□□□ -1.83
RFC3P40938 MTND2P15-201ENST00000418575 892 ntBASIC3.59□□□□□ -1.83
RFC3P40938 RFESDP1-201ENST00000422350 461 ntBASIC3.59□□□□□ -1.83
RFC3P40938 AL031736.2-201ENST00000426573 787 ntBASIC3.59□□□□□ -1.83
RFC3P40938 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.59□□□□□ -1.83
RFC3P40938 AC018644.1-201ENST00000429934 551 ntBASIC3.59□□□□□ -1.83
RFC3P40938 HIGD1AP4-201ENST00000430194 280 ntBASIC3.59□□□□□ -1.83
RFC3P40938 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.59□□□□□ -1.83
RFC3P40938 AL035246.1-201ENST00000433554 1255 ntBASIC3.59□□□□□ -1.83
RFC3P40938 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.59□□□□□ -1.83
RFC3P40938 RANP8-201ENST00000444720 713 ntBASIC3.59□□□□□ -1.83
RFC3P40938 RPL7L1P8-201ENST00000469911 741 ntBASIC3.59□□□□□ -1.83
RFC3P40938 AC090543.1-201ENST00000492168 485 ntBASIC3.59□□□□□ -1.83
RFC3P40938 AP002812.1-201ENST00000495378 474 ntBASIC3.59□□□□□ -1.83
RFC3P40938 HMGB1P21-201ENST00000502313 581 ntBASIC3.59□□□□□ -1.83
RFC3P40938 RNU6-760P-201ENST00000516078 97 ntBASIC3.59□□□□□ -1.83
RFC3P40938 TRMT10BP1-201ENST00000519377 943 ntBASIC3.59□□□□□ -1.83
RFC3P40938 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.59□□□□□ -1.83
RFC3P40938 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RFC3P40938 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.59□□□□□ -1.83
RFC3P40938 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.59□□□□□ -1.83
RFC3P40938 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.59□□□□□ -1.83
RFC3P40938 AC010680.4-201ENST00000605334 543 ntBASIC3.59□□□□□ -1.83
RFC3P40938 AL451086.1-201ENST00000605596 223 ntBASIC3.59□□□□□ -1.83
RFC3P40938 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.59□□□□□ -1.83
RFC3P40938 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.59□□□□□ -1.83
RFC3P40938 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RFC3P40938 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
RFC3P40938 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
RFC3P40938 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
RFC3P40938 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.59□□□□□ -1.84
RFC3P40938 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.84
RFC3P40938 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RFC3P40938 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RFC3P40938 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RFC3P40938 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
RFC3P40938 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms