Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.7□□□□□ -1.66
USP6P35125 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.7□□□□□ -1.66
USP6P35125 DPRXP4-201ENST00000578053 568 ntBASIC4.7□□□□□ -1.66
USP6P35125 BRDTP1-201ENST00000605735 677 ntBASIC4.7□□□□□ -1.66
USP6P35125 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP6P35125 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP6P35125 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.69□□□□□ -1.66
USP6P35125 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
USP6P35125 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP6P35125 RNU6-386P-201ENST00000362650 107 ntBASIC4.69□□□□□ -1.66
USP6P35125 RSL24D1P1-201ENST00000404972 493 ntBASIC4.69□□□□□ -1.66
USP6P35125 AL034379.1-201ENST00000423216 253 ntBASIC4.69□□□□□ -1.66
USP6P35125 ANP32BP2-201ENST00000454525 545 ntBASIC4.69□□□□□ -1.66
USP6P35125 NPM1P17-201ENST00000479221 602 ntBASIC4.69□□□□□ -1.66
USP6P35125 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.69□□□□□ -1.66
USP6P35125 BTF3L4P4-201ENST00000506381 449 ntBASIC4.69□□□□□ -1.66
USP6P35125 SNORA48.9-201ENST00000516419 162 ntBASIC4.69□□□□□ -1.66
USP6P35125 HMGB1P19-201ENST00000517578 577 ntBASIC4.69□□□□□ -1.66
USP6P35125 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.69□□□□□ -1.66
USP6P35125 MYL12AP1-201ENST00000518490 515 ntBASIC4.69□□□□□ -1.66
USP6P35125 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.69□□□□□ -1.66
USP6P35125 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.69□□□□□ -1.66
USP6P35125 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.69□□□□□ -1.66
USP6P35125 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.69□□□□□ -1.66
USP6P35125 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.69□□□□□ -1.66
USP6P35125 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
USP6P35125 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP6P35125 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.69□□□□□ -1.66
USP6P35125 AL353743.1-202ENST00000431724 1695 ntBASIC4.69□□□□□ -1.66
USP6P35125 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.68□□□□□ -1.66
USP6P35125 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USP6P35125 DDX6P1-205ENST00000441966 1436 ntBASIC4.68□□□□□ -1.66
USP6P35125 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
USP6P35125 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP6P35125 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.68□□□□□ -1.66
USP6P35125 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USP6P35125 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.68□□□□□ -1.66
USP6P35125 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.68□□□□□ -1.66
USP6P35125 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP6P35125 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USP6P35125 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USP6P35125 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.68□□□□□ -1.66
USP6P35125 SUMO2P4-201ENST00000504193 276 ntBASIC4.68□□□□□ -1.66
USP6P35125 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.68□□□□□ -1.66
USP6P35125 AP005205.1-201ENST00000563503 508 ntBASIC4.68□□□□□ -1.66
USP6P35125 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.68□□□□□ -1.66
USP6P35125 FAM60CP-201ENST00000591086 664 ntBASIC4.68□□□□□ -1.66
USP6P35125 AC067838.1-201ENST00000606064 577 ntBASIC4.68□□□□□ -1.66
USP6P35125 AC116312.1-201ENST00000606841 314 ntBASIC4.68□□□□□ -1.66
USP6P35125 AC015813.4-201ENST00000610469 179 ntBASIC4.68□□□□□ -1.66
USP6P35125 NMD3P1-201ENST00000439704 1488 ntBASIC4.68□□□□□ -1.66
USP6P35125 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.68□□□□□ -1.66
USP6P35125 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.68□□□□□ -1.66
USP6P35125 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP6P35125 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.68□□□□□ -1.66
USP6P35125 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP6P35125 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.68□□□□□ -1.66
USP6P35125 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP6P35125 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
USP6P35125 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
USP6P35125 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
USP6P35125 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP6P35125 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
USP6P35125 RNU6-697P-201ENST00000363348 107 ntBASIC4.67□□□□□ -1.66
USP6P35125 AC093719.1-202ENST00000392735 373 ntBASIC4.67□□□□□ -1.66
USP6P35125 RNA5SP104-201ENST00000410989 118 ntBASIC4.67□□□□□ -1.66
USP6P35125 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.67□□□□□ -1.66
USP6P35125 AL671855.1-201ENST00000446875 1203 ntBASIC4.67□□□□□ -1.66
USP6P35125 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.67□□□□□ -1.66
USP6P35125 HMGB1P21-201ENST00000502313 581 ntBASIC4.67□□□□□ -1.66
USP6P35125 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.67□□□□□ -1.66
USP6P35125 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.67□□□□□ -1.66
USP6P35125 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.67□□□□□ -1.66
USP6P35125 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.67□□□□□ -1.66
USP6P35125 AL121839.1-201ENST00000556233 1185 ntBASIC4.67□□□□□ -1.66
USP6P35125 AC116158.1-201ENST00000560231 2129 ntBASIC4.67□□□□□ -1.66
USP6P35125 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.67□□□□□ -1.66
USP6P35125 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.67□□□□□ -1.66
USP6P35125 AC015802.5-201ENST00000607478 399 ntBASIC4.67□□□□□ -1.66
USP6P35125 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.67□□□□□ -1.66
USP6P35125 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP6P35125 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.67□□□□□ -1.66
USP6P35125 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.67□□□□□ -1.66
USP6P35125 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
USP6P35125 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP6P35125 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
USP6P35125 AL034403.1-201ENST00000399414 885 ntBASIC4.66□□□□□ -1.66
USP6P35125 DHFRP5-201ENST00000406944 564 ntBASIC4.66□□□□□ -1.66
USP6P35125 HSPE1P8-201ENST00000406997 288 ntBASIC4.66□□□□□ -1.66
USP6P35125 MTND4P22-201ENST00000413116 1169 ntBASIC4.66□□□□□ -1.66
USP6P35125 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.66□□□□□ -1.66
USP6P35125 AL356535.1-201ENST00000440335 398 ntBASIC4.66□□□□□ -1.66
USP6P35125 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.66□□□□□ -1.66
USP6P35125 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.66□□□□□ -1.66
USP6P35125 RSL24D1P3-201ENST00000449255 495 ntBASIC4.66□□□□□ -1.66
USP6P35125 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.66□□□□□ -1.66
USP6P35125 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.66□□□□□ -1.66
USP6P35125 RPS3AP14-201ENST00000483907 780 ntBASIC4.66□□□□□ -1.66
USP6P35125 IGHV3-32-201ENST00000519182 355 ntBASIC4.66□□□□□ -1.66
USP6P35125 AP000926.4-201ENST00000527351 454 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 156.4 ms