Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 HLA-N-201ENST00000437516 135 ntBASIC3.11□□□□□ -1.91
LAMA1P25391 RPSAP41-201ENST00000439695 860 ntBASIC3.11□□□□□ -1.91
LAMA1P25391 AC093156.1-201ENST00000440382 670 ntBASIC3.11□□□□□ -1.91
LAMA1P25391 AC140076.1-201ENST00000449897 361 ntBASIC3.11□□□□□ -1.91
LAMA1P25391 HIGD1AP3-201ENST00000515857 278 ntBASIC3.11□□□□□ -1.91
LAMA1P25391 AL157394.1-201ENST00000562983 1224 ntBASIC3.11□□□□□ -1.91
LAMA1P25391 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.11□□□□□ -1.91
LAMA1P25391 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
LAMA1P25391 AC093849.1-201ENST00000563631 2209 ntBASIC3.11□□□□□ -1.91
LAMA1P25391 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
LAMA1P25391 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LAMA1P25391 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LAMA1P25391 SNORA18.3-201ENST00000384122 132 ntBASIC3.11□□□□□ -1.91
LAMA1P25391 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.11□□□□□ -1.91
LAMA1P25391 AL356535.1-201ENST00000440335 398 ntBASIC3.11□□□□□ -1.91
LAMA1P25391 SLC31A1P1-201ENST00000451221 567 ntBASIC3.11□□□□□ -1.91
LAMA1P25391 AC128713.1-201ENST00000471495 306 ntBASIC3.11□□□□□ -1.91
LAMA1P25391 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LAMA1P25391 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.11□□□□□ -1.91
LAMA1P25391 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.11□□□□□ -1.91
LAMA1P25391 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.11□□□□□ -1.91
LAMA1P25391 AP002404.1-201ENST00000532005 451 ntBASIC3.11□□□□□ -1.91
LAMA1P25391 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.11□□□□□ -1.91
LAMA1P25391 EIF1P6-201ENST00000600054 334 ntBASIC3.11□□□□□ -1.91
LAMA1P25391 AC010149.2-201ENST00000637608 315 ntBASIC3.11□□□□□ -1.91
LAMA1P25391 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LAMA1P25391 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LAMA1P25391 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LAMA1P25391 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LAMA1P25391 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LAMA1P25391 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
LAMA1P25391 BMS1P22-201ENST00000414726 313 ntBASIC3.1□□□□□ -1.91
LAMA1P25391 ETF1P3-201ENST00000430422 1160 ntBASIC3.1□□□□□ -1.91
LAMA1P25391 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.1□□□□□ -1.91
LAMA1P25391 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LAMA1P25391 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.1□□□□□ -1.91
LAMA1P25391 AC234778.2-201ENST00000566241 354 ntBASIC3.1□□□□□ -1.91
LAMA1P25391 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.1□□□□□ -1.91
LAMA1P25391 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.1□□□□□ -1.91
LAMA1P25391 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.1□□□□□ -1.91
LAMA1P25391 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
LAMA1P25391 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LAMA1P25391 DDX18P4-201ENST00000511690 1966 ntBASIC3.1□□□□□ -1.91
LAMA1P25391 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LAMA1P25391 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC3.1□□□□□ -1.91
LAMA1P25391 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LAMA1P25391 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
LAMA1P25391 AL353678.1-201ENST00000422735 741 ntBASIC3.1□□□□□ -1.91
LAMA1P25391 IFNNP1-201ENST00000429219 553 ntBASIC3.1□□□□□ -1.91
LAMA1P25391 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.1□□□□□ -1.91
LAMA1P25391 RNU4-29P-201ENST00000515943 174 ntBASIC3.1□□□□□ -1.91
LAMA1P25391 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.1□□□□□ -1.91
LAMA1P25391 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LAMA1P25391 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LAMA1P25391 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
LAMA1P25391 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LAMA1P25391 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
LAMA1P25391 MIR513A2-201ENST00000385249 127 ntBASIC3.09□□□□□ -1.91
LAMA1P25391 NPM1P37-201ENST00000403105 874 ntBASIC3.09□□□□□ -1.91
LAMA1P25391 RPS20P32-201ENST00000456044 356 ntBASIC3.09□□□□□ -1.91
LAMA1P25391 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.09□□□□□ -1.91
LAMA1P25391 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.09□□□□□ -1.91
LAMA1P25391 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.09□□□□□ -1.91
LAMA1P25391 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.09□□□□□ -1.91
LAMA1P25391 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.09□□□□□ -1.91
LAMA1P25391 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.09□□□□□ -1.91
LAMA1P25391 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LAMA1P25391 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
LAMA1P25391 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC3.09□□□□□ -1.91
LAMA1P25391 RPS24P12-201ENST00000402084 394 ntBASIC3.09□□□□□ -1.91
LAMA1P25391 AC019097.1-201ENST00000424783 735 ntBASIC3.09□□□□□ -1.91
LAMA1P25391 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.09□□□□□ -1.91
LAMA1P25391 SNRPCP3-201ENST00000474888 476 ntBASIC3.09□□□□□ -1.91
LAMA1P25391 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.09□□□□□ -1.91
LAMA1P25391 AC106734.1-201ENST00000568646 663 ntBASIC3.09□□□□□ -1.91
LAMA1P25391 AC004832.5-201ENST00000608677 401 ntBASIC3.09□□□□□ -1.91
LAMA1P25391 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
LAMA1P25391 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.09□□□□□ -1.91
LAMA1P25391 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.09□□□□□ -1.92
LAMA1P25391 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.09□□□□□ -1.92
LAMA1P25391 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
LAMA1P25391 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
LAMA1P25391 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
LAMA1P25391 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
LAMA1P25391 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
LAMA1P25391 AL139281.1-201ENST00000422120 335 ntBASIC3.08□□□□□ -1.92
LAMA1P25391 EIF4EP1-201ENST00000422311 642 ntBASIC3.08□□□□□ -1.92
LAMA1P25391 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.08□□□□□ -1.92
LAMA1P25391 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.08□□□□□ -1.92
LAMA1P25391 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
LAMA1P25391 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.08□□□□□ -1.92
LAMA1P25391 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.08□□□□□ -1.92
LAMA1P25391 AC005798.1-201ENST00000513715 387 ntBASIC3.08□□□□□ -1.92
LAMA1P25391 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.08□□□□□ -1.92
LAMA1P25391 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.08□□□□□ -1.92
LAMA1P25391 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.08□□□□□ -1.92
LAMA1P25391 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LAMA1P25391 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
LAMA1P25391 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LAMA1P25391 AC104058.1-201ENST00000448028 297 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms