Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.94□□□□□ -1.78
XRCC1P18887 AC084757.1-201ENST00000559987 490 ntBASIC3.94□□□□□ -1.78
XRCC1P18887 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.94□□□□□ -1.78
XRCC1P18887 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.94□□□□□ -1.78
XRCC1P18887 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.94□□□□□ -1.78
XRCC1P18887 MIR6868-201ENST00000611215 58 ntBASIC3.94□□□□□ -1.78
XRCC1P18887 MIR6875-201ENST00000617506 72 ntBASIC3.94□□□□□ -1.78
XRCC1P18887 AC020923.1-201ENST00000624021 917 ntBASIC3.94□□□□□ -1.78
XRCC1P18887 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.94□□□□□ -1.78
XRCC1P18887 OR5BE1P-202ENST00000641168 1176 ntBASIC3.94□□□□□ -1.78
XRCC1P18887 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
XRCC1P18887 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
XRCC1P18887 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
XRCC1P18887 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.94□□□□□ -1.78
XRCC1P18887 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
XRCC1P18887 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
XRCC1P18887 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
XRCC1P18887 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
XRCC1P18887 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
XRCC1P18887 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
XRCC1P18887 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.93□□□□□ -1.78
XRCC1P18887 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.93□□□□□ -1.78
XRCC1P18887 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
XRCC1P18887 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.93□□□□□ -1.78
XRCC1P18887 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.93□□□□□ -1.78
XRCC1P18887 RNU4-6P-201ENST00000410804 122 ntBASIC3.93□□□□□ -1.78
XRCC1P18887 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.93□□□□□ -1.78
XRCC1P18887 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.93□□□□□ -1.78
XRCC1P18887 IFNNP1-201ENST00000429219 553 ntBASIC3.93□□□□□ -1.78
XRCC1P18887 ATP5HP2-201ENST00000433885 485 ntBASIC3.93□□□□□ -1.78
XRCC1P18887 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.93□□□□□ -1.78
XRCC1P18887 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
XRCC1P18887 AC010683.1-201ENST00000473673 378 ntBASIC3.93□□□□□ -1.78
XRCC1P18887 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.93□□□□□ -1.78
XRCC1P18887 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.93□□□□□ -1.78
XRCC1P18887 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.93□□□□□ -1.78
XRCC1P18887 MTND1P6-201ENST00000523621 946 ntBASIC3.93□□□□□ -1.78
XRCC1P18887 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.93□□□□□ -1.78
XRCC1P18887 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.93□□□□□ -1.78
XRCC1P18887 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.93□□□□□ -1.78
XRCC1P18887 MTND4LP24-201ENST00000572277 291 ntBASIC3.93□□□□□ -1.78
XRCC1P18887 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.93□□□□□ -1.78
XRCC1P18887 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.93□□□□□ -1.78
XRCC1P18887 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.93□□□□□ -1.78
XRCC1P18887 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.93□□□□□ -1.78
XRCC1P18887 MRPS35P3-201ENST00000603189 709 ntBASIC3.93□□□□□ -1.78
XRCC1P18887 AL606490.9-201ENST00000603331 271 ntBASIC3.93□□□□□ -1.78
XRCC1P18887 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
XRCC1P18887 uc_338.32-201ENST00000615087 172 ntBASIC3.93□□□□□ -1.78
XRCC1P18887 AL445493.3-201ENST00000619568 477 ntBASIC3.93□□□□□ -1.78
XRCC1P18887 AP006248.3-201ENST00000623580 594 ntBASIC3.93□□□□□ -1.78
XRCC1P18887 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.93□□□□□ -1.78
XRCC1P18887 CDRT1-208ENST00000630868 794 ntBASIC3.93□□□□□ -1.78
XRCC1P18887 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
XRCC1P18887 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.93□□□□□ -1.78
XRCC1P18887 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
XRCC1P18887 AC007529.1-201ENST00000418574 2178 ntBASIC3.93□□□□□ -1.78
XRCC1P18887 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
XRCC1P18887 NCAPGP1-201ENST00000505112 1814 ntBASIC3.93□□□□□ -1.78
XRCC1P18887 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
XRCC1P18887 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.93□□□□□ -1.78
XRCC1P18887 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.93□□□□□ -1.78
XRCC1P18887 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
XRCC1P18887 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
XRCC1P18887 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.92□□□□□ -1.78
XRCC1P18887 AC022031.1-201ENST00000585985 2593 ntBASIC3.92□□□□□ -1.78
XRCC1P18887 AL353743.4-201ENST00000422653 1547 ntBASIC3.92□□□□□ -1.78
XRCC1P18887 RNU1-18P-201ENST00000363062 164 ntBASIC3.92□□□□□ -1.78
XRCC1P18887 SNORD35B-201ENST00000363660 87 ntBASIC3.92□□□□□ -1.78
XRCC1P18887 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
XRCC1P18887 HMGB3P19-201ENST00000403971 560 ntBASIC3.92□□□□□ -1.78
XRCC1P18887 AMD1P2-201ENST00000412936 992 ntBASIC3.92□□□□□ -1.78
XRCC1P18887 MTATP6P19-201ENST00000413797 659 ntBASIC3.92□□□□□ -1.78
XRCC1P18887 VTA1P1-201ENST00000414044 866 ntBASIC3.92□□□□□ -1.78
XRCC1P18887 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.92□□□□□ -1.78
XRCC1P18887 PNRC2P1-201ENST00000423940 420 ntBASIC3.92□□□□□ -1.78
XRCC1P18887 NPM1P34-201ENST00000428821 893 ntBASIC3.92□□□□□ -1.78
XRCC1P18887 RPL17P35-201ENST00000432217 549 ntBASIC3.92□□□□□ -1.78
XRCC1P18887 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.92□□□□□ -1.78
XRCC1P18887 PPIAP17-201ENST00000438507 471 ntBASIC3.92□□□□□ -1.78
XRCC1P18887 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.92□□□□□ -1.78
XRCC1P18887 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.92□□□□□ -1.78
XRCC1P18887 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.92□□□□□ -1.78
XRCC1P18887 RPL37P3-201ENST00000456825 293 ntBASIC3.92□□□□□ -1.78
XRCC1P18887 VN1R105P-201ENST00000486595 910 ntBASIC3.92□□□□□ -1.78
XRCC1P18887 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.92□□□□□ -1.78
XRCC1P18887 AC027338.1-201ENST00000514840 825 ntBASIC3.92□□□□□ -1.78
XRCC1P18887 SNORD116-26-201ENST00000516006 96 ntBASIC3.92□□□□□ -1.78
XRCC1P18887 RNU6-1102P-201ENST00000516149 96 ntBASIC3.92□□□□□ -1.78
XRCC1P18887 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.92□□□□□ -1.78
XRCC1P18887 IGKV2-36-201ENST00000519999 223 ntBASIC3.92□□□□□ -1.78
XRCC1P18887 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.92□□□□□ -1.78
XRCC1P18887 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.92□□□□□ -1.78
XRCC1P18887 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.92□□□□□ -1.78
XRCC1P18887 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
XRCC1P18887 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
XRCC1P18887 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.92□□□□□ -1.78
XRCC1P18887 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.92□□□□□ -1.78
XRCC1P18887 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.92□□□□□ -1.78
XRCC1P18887 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms