Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL11A1P12107 Z83843.1-201ENST00000604070 3685 ntBASIC3.83□□□□□ -1.8
COL11A1P12107 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL11A1P12107 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL11A1P12107 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL11A1P12107 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL11A1P12107 AL513302.2-201ENST00000562313 1842 ntBASIC3.82□□□□□ -1.8
COL11A1P12107 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
COL11A1P12107 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
COL11A1P12107 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.82□□□□□ -1.8
COL11A1P12107 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.82□□□□□ -1.8
COL11A1P12107 RPS26P47-201ENST00000427219 348 ntBASIC3.82□□□□□ -1.8
COL11A1P12107 AC000041.1-201ENST00000439655 175 ntBASIC3.82□□□□□ -1.8
COL11A1P12107 AC025750.2-201ENST00000442609 450 ntBASIC3.82□□□□□ -1.8
COL11A1P12107 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC3.82□□□□□ -1.8
COL11A1P12107 AC073522.1-201ENST00000483312 377 ntBASIC3.82□□□□□ -1.8
COL11A1P12107 RN7SL504P-201ENST00000494496 287 ntBASIC3.82□□□□□ -1.8
COL11A1P12107 HMGB1P21-201ENST00000502313 581 ntBASIC3.82□□□□□ -1.8
COL11A1P12107 AC021678.1-201ENST00000505195 936 ntBASIC3.82□□□□□ -1.8
COL11A1P12107 AP000926.4-201ENST00000527351 454 ntBASIC3.82□□□□□ -1.8
COL11A1P12107 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.82□□□□□ -1.8
COL11A1P12107 AC092868.3-201ENST00000560515 784 ntBASIC3.82□□□□□ -1.8
COL11A1P12107 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.82□□□□□ -1.8
COL11A1P12107 AC010680.3-201ENST00000604215 520 ntBASIC3.82□□□□□ -1.8
COL11A1P12107 RNVU1-4-201ENST00000612985 164 ntBASIC3.82□□□□□ -1.8
COL11A1P12107 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.82□□□□□ -1.8
COL11A1P12107 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL11A1P12107 FAM35DP-201ENST00000323387 2712 ntBASIC3.82□□□□□ -1.8
COL11A1P12107 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
COL11A1P12107 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
COL11A1P12107 AF117829.1-206ENST00000621883 3802 ntBASIC3.82□□□□□ -1.8
COL11A1P12107 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
COL11A1P12107 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.82□□□□□ -1.8
COL11A1P12107 ZNF603P-201ENST00000405613 487 ntBASIC3.81□□□□□ -1.8
COL11A1P12107 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.81□□□□□ -1.8
COL11A1P12107 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.81□□□□□ -1.8
COL11A1P12107 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.81□□□□□ -1.8
COL11A1P12107 RPL7P44-201ENST00000424827 742 ntBASIC3.81□□□□□ -1.8
COL11A1P12107 AL158071.1-201ENST00000430315 461 ntBASIC3.81□□□□□ -1.8
COL11A1P12107 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.81□□□□□ -1.8
COL11A1P12107 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.81□□□□□ -1.8
COL11A1P12107 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.81□□□□□ -1.8
COL11A1P12107 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.81□□□□□ -1.8
COL11A1P12107 AC008481.1-201ENST00000463278 396 ntBASIC3.81□□□□□ -1.8
COL11A1P12107 RPL7P23-201ENST00000493874 747 ntBASIC3.81□□□□□ -1.8
COL11A1P12107 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.81□□□□□ -1.8
COL11A1P12107 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.81□□□□□ -1.8
COL11A1P12107 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.81□□□□□ -1.8
COL11A1P12107 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.81□□□□□ -1.8
COL11A1P12107 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.81□□□□□ -1.8
COL11A1P12107 MIR4672-201ENST00000583126 81 ntBASIC3.81□□□□□ -1.8
COL11A1P12107 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.81□□□□□ -1.8
COL11A1P12107 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.81□□□□□ -1.8
COL11A1P12107 AL513477.2-201ENST00000607858 568 ntBASIC3.81□□□□□ -1.8
COL11A1P12107 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
COL11A1P12107 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
COL11A1P12107 CR381670.1-201ENST00000624291 1693 ntBASIC3.81□□□□□ -1.8
COL11A1P12107 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.81□□□□□ -1.8
COL11A1P12107 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL11A1P12107 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.81□□□□□ -1.8
COL11A1P12107 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL11A1P12107 AL356489.2-201ENST00000566968 3528 ntBASIC3.81□□□□□ -1.8
COL11A1P12107 SNORA38.1-201ENST00000364172 131 ntBASIC3.81□□□□□ -1.8
COL11A1P12107 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
COL11A1P12107 UBA52P6-201ENST00000399822 382 ntBASIC3.81□□□□□ -1.8
COL11A1P12107 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.81□□□□□ -1.8
COL11A1P12107 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COL11A1P12107 UBE2V1P1-201ENST00000430836 445 ntBASIC3.81□□□□□ -1.8
COL11A1P12107 AC023598.1-201ENST00000472521 361 ntBASIC3.81□□□□□ -1.8
COL11A1P12107 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.81□□□□□ -1.8
COL11A1P12107 AC023141.12-201ENST00000512399 199 ntBASIC3.81□□□□□ -1.8
COL11A1P12107 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.81□□□□□ -1.8
COL11A1P12107 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.81□□□□□ -1.8
COL11A1P12107 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.81□□□□□ -1.8
COL11A1P12107 AC087888.1-201ENST00000550884 1254 ntBASIC3.81□□□□□ -1.8
COL11A1P12107 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.81□□□□□ -1.8
COL11A1P12107 AL162274.2-201ENST00000614406 332 ntBASIC3.81□□□□□ -1.8
COL11A1P12107 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL11A1P12107 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
COL11A1P12107 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.81□□□□□ -1.8
COL11A1P12107 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.81□□□□□ -1.8
COL11A1P12107 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL11A1P12107 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.81□□□□□ -1.8
COL11A1P12107 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.81□□□□□ -1.8
COL11A1P12107 AC000123.3-201ENST00000624029 4975 ntBASIC3.8□□□□□ -1.8
COL11A1P12107 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL11A1P12107 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC3.8□□□□□ -1.8
COL11A1P12107 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.8□□□□□ -1.8
COL11A1P12107 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL11A1P12107 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL11A1P12107 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.8□□□□□ -1.8
COL11A1P12107 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL11A1P12107 AL356968.1-201ENST00000416622 474 ntBASIC3.8□□□□□ -1.8
COL11A1P12107 ATP5C1P1-201ENST00000441945 895 ntBASIC3.8□□□□□ -1.8
COL11A1P12107 AC080014.1-201ENST00000496877 1201 ntBASIC3.8□□□□□ -1.8
COL11A1P12107 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.8□□□□□ -1.8
COL11A1P12107 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.8□□□□□ -1.8
COL11A1P12107 AL121576.1-201ENST00000556055 276 ntBASIC3.8□□□□□ -1.8
COL11A1P12107 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC3.8□□□□□ -1.8
COL11A1P12107 AC099489.2-201ENST00000574976 260 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms